Evidence map›Paper›PMID 17724162›Full record

ArticleThe Journal of general physiology2007

Simulation of Ca2+ movements within the sarcomere of fast-twitch mouse fibers stimulated by action potentials.

Stephen M Baylor, Stephen Hollingworth

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in The Journal of general physiology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 63 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Cytosolic CaBiophysical reports · 2023
    Article
  8. Review
  9. Article
  10. Activation of skeletal muscle is controlled by a dual-filament mechano-sensing mechanism.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  11. Article
  12. Review
  13. Article
  14. Elevated CaFrontiers in physiology · 2022
    Article
  15. Review
  16. Comprehensive Simulation of CaInternational journal of molecular sciences · 2021
    Article
  17. A new set of equations for the simplified calibration of fluorescence CaJournal of muscle research and cell motility · 2021
    Article
  18. Components of activation heat in skeletal muscle.Journal of muscle research and cell motility · 2021
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Stephen M BaylorDepartment of Physiology, University of Pennsylvania School of Medicine, Philadelphia, PA 19104, USA.
Stephen Hollingworth
University of Pennsylvania · US

Funding

EXCITATION-CONTRACTION COUPLING IN STRIATED MUSCLER01NS017620 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI BAYLOR, STEPHEN M. · 1985 to 2005
$1.9M
NINDS NIH HHS NS 17620NINDS NIH HHS R01 NS017620
6 · The paper itself

Abstract

Ca(2+) release from the sarcoplasmic reticulum (SR) of skeletal muscle takes place at the triadic junctions; following release, Ca(2+) spreads within the sarcomere by diffusion. Here, we report multicompartment simulations of changes in sarcomeric Ca(2+) evoked by action potentials (APs) in fast-twitch fibers of adult mice. The simulations include Ca(2+) complexation reactions with ATP, troponin, parvalbumin, and the SR Ca(2+) pump, as well as Ca(2+) transport by the pump. Results are compared with spatially averaged Ca(2+) transients measured in mouse fibers with furaptra, a low-affinity, rapidly responding Ca(2+) indicator. The furaptra Deltaf(CaD) signal (change in the fraction of the indicator in the Ca(2+)-bound form) evoked by one AP is well simulated under the assumption that SR Ca(2+) release has a peak of 200-225 microM/ms and a FDHM of approximately 1.6 ms (16 degrees C). Deltaf(CaD) elicited by a five-shock, 67-Hz train of APs is well simulated under the assumption that in response to APs 2-5, Ca(2+) release decreases progressively from 0.25 to 0.15 times that elicited by the first AP, a reduction likely due to Ca(2+) inactivation of Ca(2+) release. Recovery from inactivation was studied with a two-AP protocol; the amplitude of the second release recovered to >0.9 times that of the first with a rate constant of 7 s(-1). An obvious feature of Deltaf(CaD) during a five-shock train is a progressive decline in the rate of decay from the individual peaks of Deltaf(CaD). According to the simulations, this decline is due to a reduction in available Ca(2+) binding sites on troponin and parvalbumin. The effects of sarcomere length, the location of the triadic junctions, resting [Ca(2+)], the parvalbumin concentration, and possible uptake of Ca(2+) by mitochondria were also investigated. Overall, the simulations indicate that this reaction-diffusion model, which was originally developed for Ca(2+) sparks in frog fibers, works well when adapted to mouse fast-twitch fibers stimulated by APs.

Indexed as

Action PotentialsCalcium SignalingComputer SimulationModels, BiologicalAdenosine TriphosphateAnimalsBinding SitesDiffusionElectric StimulationFluorescent DyesFura-2In Vitro TechniquesKineticsMiceMitochondria, MuscleMuscle Fibers, Fast-Twitch2-(2-(5-carboxy)oxazole)-5-hydroxy-6-aminobenzofuran-N,N,O-triacetic acidAdenosine TriphosphateFluorescent DyesFura-2ParvalbuminsSarcoplasmic Reticulum Calcium-Transporting ATPasesTroponin

Identifiers

PMID17724162
PMCPMC2151645
OpenAlexW2096104330

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.