ArticleGenetics2007
Effects of recombination on hitchhiking diversity in the Brassica self-incompatibility locus complex.
Article in Genetics, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.
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Who cites it
18 citing papers in PubMed, 42 citations in OpenAlex.
- Development of S Haplotype-Specific Markers to Identify Genotypes of Self-Incompatibility in Radish (Plants (Basel, Switzerland) · 2024Article
- Article
- Comprehensive computational analysis of the SRK-SP11 molecular interaction underlying self-incompatibility in Brassicaceae using improved structure prediction for cysteine-rich proteins.Computational and structural biotechnology journal · 2023Article
- Brassica rapa Domestication: Untangling Wild and Feral Forms and Convergence of Crop Morphotypes.Molecular biology and evolution · 2021Article
- Species recognition in social amoebae.Journal of biosciences · 2018Article
- A naturally occurring variation in theHorticulture research · 2018Article
- Overcoming self-incompatibility in grasses: a pathway to hybrid breeding.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2016Review
- Genomic variations and distinct evolutionary rate of rare alleles in Arabidopsis thaliana.BMC evolutionary biology · 2016Article
- Analysis of S-locus and expression of S-alleles of self-compatible rapid-cycling Brassica oleracea 'TO1000DH3'.Molecular biology reports · 2014Article
- Self-incompatibility in Brassicaceae crops: lessons for interspecific incompatibility.Breeding science · 2014Review
- Association between virulence and triazole tolerance in the phytopathogenic fungus Mycosphaerella graminicola.PloS one · 2013Article
- Contrasted patterns of molecular evolution in dominant and recessive self-incompatibility haplotypes in Arabidopsis.PLoS genetics · 2012Article
- The self-compatibility mechanism in Brassica napus L. is applicable to F1 hybrid breeding.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2011Article
- Creation and maintenance of variation in allorecognition Loci: molecular analysis in various model systems.Frontiers in immunology · 2011Article
- Article
- Genetic fine-mapping of DIPLOSPOROUS in Taraxacum (dandelion; Asteraceae) indicates a duplicated DIP-gene.BMC plant biology · 2010Article
- Molecular population genetics of the SRK and SCR self-incompatibility genes in the wild plant species Brassica cretica (Brassicaceae).Genetics · 2009Article
- Article
Corrections and comments
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Authors and funding
7 authors at 4 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
In self-incompatibility, a number of S haplotypes are maintained by frequency-dependent selection, which results in trans-specific S haplotypes. The region of several kilobases (approximately 40-60 kb) from SP6 to SP2, including self-incompatibility-related genes and some adjacent genes in Brassica rapa, has high nucleotide diversity due to the hitchhiking effect, and therefore we call this region the "S-locus complex." Recombination in the S-locus complex is considered to be suppressed. We sequenced regions of >50 kb of the S-locus complex of three S haplotypes in B. rapa and found higher nucleotide diversity in intergenic regions than in coding regions. Two highly similar regions of >10 kb were found between BrS-8 and BrS-46. Phylogenetic analysis using trans-specific S haplotypes (called interspecific pairs) of B. rapa and B. oleracea suggested that recombination reduced the nucleotide diversity in these two regions and that the genes not involved in self-incompatibility in the S-locus complex and the kinase domain, but not the S domain, of SRK have also experienced recombination. Recombination may reduce hitchhiking diversity in the S-locus complex, whereas the region from the S domain to SP11 would disfavor recombination.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.