Evidence map›Paper›PMID 17720793›Full record

ArticleJournal of bacteriology2007

Abh and AbrB control of Bacillus subtilis antimicrobial gene expression.

Mark A Strauch, Benjamin G Bobay, John Cavanagh, Fude Yao, Angelo Wilson, Yoann Le Breton

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 106 citations in OpenAlex.

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  8. The alternative sigma factor SigN ofJournal of bacteriology · 2023
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  19. Frontiers in cellular and infection microbiology · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Mark A StrauchDepartment of Biomedical Sciences, Dental School, University of Maryland, Baltimore, 650 W. Baltimore Street, Baltimore, MD 21201, USA. mstrauch@umaryland.edu
Benjamin G Bobay
John Cavanagh
Fude Yao
Angelo Wilson
Yoann Le Breton
University of Maryland, Baltimore · USNorth Carolina State University · US

Funding

NMR STUDIES OF BACTERIAL REGULATORY PROTEINSR01GM055769 · NIGMS · WADSWORTH CENTER · PI CAVANAGH, JOHN, MELANDER, CHRISTIAN COREY · 1998 to 2017
$3.8M
ABRB BINDING TO DEVELOPMENTALLY CONTROLLED PROMOTERSR01GM046700 · NIGMS · UNIVERSITY OF MARYLAND BALTIMORE · PI STRAUCH, MARK A · 1992 to 2006
$1.4M
NIGMS NIH HHS GM46700NIGMS NIH HHS GM55769NIGMS NIH HHS R01 GM046700NIGMS NIH HHS R01 GM055769
6 · The paper itself

Abstract

The Bacillus subtilis abh gene encodes a protein whose N-terminal domain has 74% identity to the DNA-binding domain of the global regulatory protein AbrB. Strains with a mutation in abh showed alterations in the production of antimicrobial compounds directed against some other Bacillus species and gram-positive microbes. Relative to its wild-type parental strain, the abh mutant was found deficient, enhanced, or unaffected for the production of antimicrobial activity. Using lacZ fusions, we examined the effects of abh upon the expression of 10 promoters known to be regulated by AbrB, including five that transcribe well-characterized antimicrobial functions (SdpC, SkfA, TasA, sublancin, and subtilosin). For an otherwise wild-type background, the results show that Abh plays a negative regulatory role in the expression of four of the promoters, a positive role for the expression of three, and no apparent regulatory role in the expression of the other three promoters. Binding of AbrB and Abh to the promoter regions was examined using DNase I footprinting, and the results revealed significant differences. The transcription of abh is not autoregulated, but it is subject to a degree of AbrB-afforded negative regulation. The results indicate that Abh is part of the complex interconnected regulatory system that controls gene expression during the transition from active growth to stationary phase.

Indexed as

Gene Expression Regulation, BacterialBacillus subtilisBacterial ProteinsBase SequenceBinding SitesDNA-Binding ProteinsGenes, BacterialKineticsMolecular Sequence DataMutationPlasmidsTranscription FactorsAbrB protein, Bacillus subtilisBacterial ProteinsDNA-Binding ProteinsTranscription Factors

Identifiers

PMID17720793
PMCPMC2168746
OpenAlexW2146141525

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.