Evidence map›Paper›PMID 17716729›Full record

ReviewDevelopmental and comparative immunology2008

Diversity in penaeidin antimicrobial peptide form and function.

Brandon J Cuthbertson, Leesa J Deterding, Jason G Williams, Kenneth B Tomer, Kizee Etienne, Perry J Blackshear, Erika E Büllesbach, Paul S Gross

Open access · greenAbstract readReview
In one paragraph

Review in Developmental and comparative immunology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 84 citations in OpenAlex.

  1. Review
  2. Proline-Rich Antimicrobial Peptides from Invertebrates.Molecules (Basel, Switzerland) · 2024
    Review
  3. Article
  4. Biodegradable Polymers and Polymer Composites with Antibacterial Properties.International journal of molecular sciences · 2023
    Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Antimicrobial peptides in marine invertebrate health and disease.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2016
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Hemolymph proteins in marine crustaceans.Asian Pacific journal of tropical biomedicine · 2012
    Review
  15. Introduction to a special issue in memory of Paul S. Gross.Marine biotechnology (New York, N.Y.) · 2011
    Article
  16. Review
  17. Article
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Brandon J CuthbertsonLaboratory of Signal Transduction, NIH/NIEHS, P.O. Box 12233 (MD F3-04), 111 TW Alexander Drive, Research Triangle Park, NC 27709-2233, USA. cuthbertsonb@niehs.nih.gov
Leesa J Deterding
Jason G Williams
Kenneth B Tomer
Kizee Etienne
Perry J Blackshear
Erika E Büllesbach
Paul S Gross
National Institute of Environmental Health Sciences · USMedical University of South Carolina · USEmory University · USResearch Triangle Park Foundation · US

Funding

TTP and related proteins in the regulation of gene expressionZIAES090080 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI BLACKSHEAR, PERRY J · 2009 to 2025
$52.6M
Protein Microcharacterization ZICES102488 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI WILLIAMS, JASON · 2009 to 2025
$19.2M
TTP AND RELATED PROTEINS IN INFLAMMATORY DISEASESZ01ES090080 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI BLACKSHEAR, PERRY J · 1998 to 2008
$5.3M
Protein Characterization By Mass SpectrometryZIAES050171 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI TOMER, KENNETH · 2009 to 2013
$2.9M
Protein Characterization By Mass SpectrometryZ01ES050171 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI TOMER, KENNETH · 2000 to 2008
$1.1M
Protein Microcharacterization FacilityZ01ES101564 · NIEHS · ENVIRONMENTAL HEALTH SCIENCES · PI TOMER, KENNETH · 2003 to 2007
$685k
Protein MicrocharacterizationZ01ES102488 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI WILLIAMS, JASON · 2008 to 2008
$564k
Intramural NIH HHS NIH0012312697
6 · The paper itself

Abstract

Penaeidins are a diverse family of two-domain antimicrobial peptides expressed in shrimp. Variation in penaeidin sequence results in functional diversity, which was discovered using synthetic reproductions of native penaeidins. An isoform of penaeidin class 3 from Litopenaeus setiferus (Litset Pen3-4) was synthesized using native ligation and compared directly with the synthetic penaeidin class 4 known to be expressed in the same organism. New antimicrobial activity data are included in this review that emphasize differences in effectiveness that are apparent from a direct comparison of two classes. A novel approach to intact penaeidin analysis is presented in the form of Fourier Transform Ion-Cyclotron Resonance Mass Spectrometry, which has implications for the identification of individual penaeidin isoforms without chemical modification or enzymatic cleavage. The new information included in this review helps gather the perspective on relevance of penaeidin diversity to antimicrobial function, the use of synthetic peptides as tools to evaluate specific immune functions and the application of high mass resolution, top-down sequencing methods to the intact analysis of individual penaeidin isoforms.

Indexed as

Amino Acid SequenceAnimalsAntimicrobial Cationic PeptidesMicrobial Sensitivity TestsModels, MolecularMolecular Sequence DataPenaeidaeProtein ConformationProtein IsoformsAntimicrobial Cationic PeptidesProtein Isoforms

Identifiers

PMID17716729
PMCPMC2245800
OpenAlexW2029248761

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.