Evidence map›Paper›PMID 17714078›Full record

ArticleThe Biochemical journal2007

A CBS domain-containing pyrophosphatase of Moorella thermoacetica is regulated by adenine nucleotides.

Joonas Jämsen, Heidi Tuominen, Anu Salminen, Georgiy A Belogurov, Natalia N Magretova, Alexander A Baykov, Reijo Lahti

Abstract read
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Article in The Biochemical journal, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Chromophorylation of cyanobacteriochrome Slr1393 fromThe Journal of biological chemistry · 2018
    Article
  6. Article
  7. Article
  8. Pyrophosphate-fueled Na+ and H+ transport in prokaryotes.Microbiology and molecular biology reviews : MMBR · 2013
    Review
  9. Article
  10. Review
  11. Expression, purification and crystallization of the cofactor-independent monooxygenase SnoaB from the nogalamycin biosynthetic pathway.Acta crystallographica. Section F, Structural biology and crystallization communications · 2009
    Article
  12. Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Joonas JämsenDepartment of Biochemistry and Food Chemistry, University of Turku, FIN-20014 Turku, Finland.
Heidi Tuominen
Anu Salminen
Georgiy A Belogurov
Natalia N Magretova
Alexander A Baykov
Reijo Lahti

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

CBS (cystathionine beta-synthase) domains are found in proteins from all kingdoms of life, and point mutations in these domains are responsible for a variety of hereditary diseases in humans; however, the functions of CBS domains are not well understood. In the present study, we cloned, expressed in Escherichia coli, and characterized a family II PPase (inorganic pyrophosphatase) from Moorella thermoacetica (mtCBS-PPase) that has a pair of tandem 60-amino-acid CBS domains within its N-terminal domain. Because mtCBS-PPase is a dimer and requires transition metal ions (Co2+ or Mn2+) for activity, it resembles common family II PPases, which lack CBS domains. The mtCBS-PPase, however, has lower activity than common family II PPases, is potently inhibited by ADP and AMP, and is activated up to 1.6-fold by ATP. Inhibition by AMP is competitive, whereas inhibition by ADP and activation by ATP are both of mixed types. The nucleotides are effective at nanomolar (ADP) or micromolar concentrations (AMP and ATP) and appear to compete for the same site on the enzyme. The nucleotide-binding affinities are thus 100-10000-fold higher than for other CBS-domain-containing proteins. Interestingly, genes encoding CBS-PPase occur most frequently in bacteria that have a membrane-bound H+-translocating PPase with a comparable PP(i)-hydrolysing activity. Our results suggest that soluble nucleotide-regulated PPases act as amplifiers of metabolism in bacteria by enhancing or suppressing ATP production and biosynthetic reactions at high and low [ATP]/([AMP]+[ADP]) ratios respectively.

Indexed as

Adenine NucleotidesCatalysisCloning, MolecularDimerizationElectrophoresis, Polyacrylamide GelInorganic PyrophosphataseKineticsMutagenesis, Site-DirectedSubstrate SpecificityThermoanaerobacteriumAdenine NucleotidesInorganic Pyrophosphatase

Identifiers

PMID17714078
PMCPMC2267367

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.