Evidence map›Paper›PMID 17714077›Full record

ArticleThe Biochemical journal2007

Structure-based design of small peptide inhibitors of protein kinase CK2 subunit interaction.

Béatrice Laudet, Caroline Barette, Vincent Dulery, Olivier Renaudet, Pascal Dumy, Alexandra Metz, Renaud Prudent, Alexandre Deshiere, Otto Dideberg, Odile Filhol and 1 more

Abstract read
In one paragraph

Article in The Biochemical journal, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Review
  6. Review
  7. Development of small cyclic peptides targeting the CK2α/β interface.Chemical communications (Cambridge, England) · 2022
    Article
  8. Predictive functional, statistical and structural analysis ofFrontiers in molecular biosciences · 2022
    Article
  9. Review
  10. Article
  11. Review
  12. Review
  13. Article
  14. Article
  15. Targeting protein kinase CK2 in the treatment of cholangiocarcinoma.Exploration of targeted anti-tumor therapy · 2021
    Review
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Béatrice LaudetInserm, U873, Grenoble, F-38054, France.
Caroline Barette
Vincent Dulery
Olivier Renaudet
Pascal Dumy
Alexandra Metz
Renaud Prudent
Alexandre Deshiere
Otto Dideberg
Odile Filhol
Claude Cochet

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

X-ray crystallography studies, as well as live-cell fluorescent imaging, have recently challenged the traditional view of protein kinase CK2. Unbalanced expression of catalytic and regulatory CK2 subunits has been observed in a variety of tissues and tumours. Thus the potential intersubunit flexibility suggested by these studies raises the likely prospect that the CK2 holoenzyme complex is subject to disassembly and reassembly. In the present paper, we show evidence for the reversible multimeric organization of the CK2 holoenzyme complex in vitro. We used a combination of site-directed mutagenesis, binding experiments and functional assays to show that, both in vitro and in vivo, only a small set of primary hydrophobic residues of CK2beta which contacts at the centre of the CK2alpha/CK2beta interface dominates affinity. The results indicate that a double mutation in CK2beta of amino acids Tyr188 and Phe190, which are complementary and fill up a hydrophobic pocket of CK2alpha, is the most disruptive to CK2alpha binding both in vitro and in living cells. Further characterization of hotspots in a cluster of hydrophobic amino acids centred around Tyr188-Phe190 led us to the structure-based design of small-peptide inhibitors. One conformationally constrained 11-mer peptide (Pc) represents a unique CK2beta-based small molecule that was particularly efficient (i) to antagonize the interaction between the CK2 subunits, (ii) to inhibit the assembly of the CK2 holoenzyme complex, and (iii) to strongly affect its substrate preference.

Indexed as

Amino Acid SequenceBase SequenceCasein Kinase IICatalysisCrystallography, X-RayDNA PrimersHeLa CellsHumansLigandsMutagenesis, Site-DirectedPeptidesProtein ConformationProtein Kinase InhibitorsRecombinant ProteinsStructure-Activity RelationshipSurface Plasmon ResonanceCasein Kinase IIDNA PrimersLigandsPeptidesProtein Kinase InhibitorsRecombinant Proteins

Identifiers

PMID17714077
PMCPMC2267368

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.