Evidence map›Paper›PMID 17710447›Full record

ArticleMycorrhiza2007

Genetic diversity and differential in vitro responses to Ni in Cenococcum geophilum isolates from serpentine soils in Portugal.

Susana C Gonçalves, António Portugal, M Teresa Gonçalves, Rita Vieira, M Amélia Martins-Loução, Helena Freitas

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In one paragraph

Article in Mycorrhiza, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
5.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 41 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Susana C GonçalvesCentro de Ecologia Funcional, Departamento de Botânica, Universidade de Coimbra, 3000-456, Coimbra, Portugal. scgoncal@ci.uc.pt.
António PortugalCentro de Ecologia Funcional, Departamento de Botânica, Universidade de Coimbra, 3000-456, Coimbra, Portugal.
M Teresa GonçalvesCentro de Ecologia Funcional, Departamento de Botânica, Universidade de Coimbra, 3000-456, Coimbra, Portugal.
Rita VieiraCentro de Ecologia Funcional, Departamento de Botânica, Universidade de Coimbra, 3000-456, Coimbra, Portugal.
M Amélia Martins-LouçãoDepartamento de Biologia Vegetal, Faculdade de Ciências, Centro de Ecologia e Biologia Vegetal, Universidade de Lisboa, Lisboa, 1749-016, Portugal.
Helena FreitasCentro de Ecologia Funcional, Departamento de Botânica, Universidade de Coimbra, 3000-456, Coimbra, Portugal.
University of Coimbra · PTNational Archaeology Museum · PT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Amplified fragment length polymorphism (AFLP) analysis was used to investigate the genetic diversity in isolates of the ectomycorrhizal fungus Cenococcum geophilum from serpentine and non-serpentine soils in Portugal. A high degree of genetic diversity was found among C. geophilum isolates; AFLP fingerprints showed that all the isolates were genetically distinct. We also assessed the in vitro Ni sensitivity in three serpentine isolates and one non-serpentine isolate. Only the non-serpentine isolate was significantly affected by the addition of Ni to the growth medium. At 30 microg g(-1) Ni, radial growth rate and biomass accumulation decreased to 73.3 and 71.6% of control, respectively, a highly significant inhibitory effect. Nickel at this concentration had no significant inhibitory effect on serpentine isolates, and so the fitness of serpentine isolates, as evaluated by radial growth rate and biomass yield, is likely unaffected by Ni in the field. In all isolates, the Ni concentration in the mycelia increased with increasing Ni concentration in the growth medium, but two profiles of Ni accumulation were identified. One serpentine isolate showed a linear trend of Ni accumulation. At the highest Ni exposure, the concentration of Ni in the mycelium of this isolate was in the hyperaccumulation range for Ni as defined for higher plants. In the remaining isolates, Ni accumulation was less pronounced and seems to approach a plateau at 30 microg g(-1) Ni. Because two profiles of Ni accumulation emerged among our Ni-insensitive serpentine isolates, this result suggests that different Ni detoxification pathways may be operating. The non-serpentine isolate whose growth was significantly affected by Ni was separated from the other isolates in the genetic analysis, suggesting a genetic basis for the Ni-sensitivity trait. This hypothesis is further supported by the fact that all isolates were maintained on medium without added Ni to avoid carry-over effects. However, because AFLP analysis failed to distinguish between serpentine and non-serpentine isolates, we cannot conclude that Ni insensitivity among our serpentine isolates is due to evolutionary adaptation. Screening a larger number of isolates, from different geographical origins and environments, should clarify the relationships between genetic diversity, morphology, and physiology in this important species.

Indexed as

Soil MicrobiologyAmplified Fragment Length Polymorphism AnalysisAscomycotaDNA, FungalGenetic VariationMycorrhizaeNickelPortugalQuercusTreesDNA, FungalNickelnickel sulfate

Identifiers

PMID17710447
OpenAlexW2066222191

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.