Evidence map›Paper›PMID 17709462›Full record

ArticleAntimicrobial agents and chemotherapy2007

Composite structure of Streptococcus pneumoniae containing the erythromycin efflux resistance gene mefI and the chloramphenicol resistance gene catQ.

Marina Mingoia, Manuela Vecchi, Ileana Cochetti, Emily Tili, Luca A Vitali, Aldo Manzin, Pietro E Varaldo, Maria Pia Montanari

Open access · greenAbstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 46 citations in OpenAlex.

  1. The Novel Macrolide Resistance GenesAntimicrobial agents and chemotherapy · 2020
    Article
  2. Antimicrobial Resistance inMicrobiology spectrum · 2018
    Review
  3. Article
  4. Resistance to Macrolide Antibiotics in Public Health Pathogens.Cold Spring Harbor perspectives in medicine · 2016
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Marina MingoiaInstitute of Microbiology and Biomedical Sciences, Polytechnic University of Marche Medical School, Via Tronto 10/A, 60020 Ancona, Italy.
Manuela Vecchi
Ileana Cochetti
Emily Tili
Luca A Vitali
Aldo Manzin
Pietro E Varaldo
Maria Pia Montanari
Czech Academy of Sciences, Institute of Microbiology · CZMarche Polytechnic University · ITUniversità di Camerino · ITUniversity of Cagliari · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In recent years mef genes, encoding efflux pumps responsible for M-type macrolide resistance, have been investigated extensively for streptococci. mef(I) is a recently described mef variant detected in particular isolates of Streptococcus pneumoniae instead of the more common mef(E) and mef(A). This study shows that mef(I) is located in a new composite genetic element, whose sequence was completely analyzed and the left and right junctions determined, demonstrating a unique genetic organization. The new composite structure (30,505 bp), designated the 5216IQ complex, consists of two halves: a left one (15,316 bp) formed by parts of the known transposons Tn5252 and Tn916, and a right one (15,115 bp) formed by a new fragment, designated the IQ element. While the defective Tn916 contained a silent tet(M) gene, the IQ element, ending with identical transposase genes on both sides and containing the mef(I) gene with an adjacent new msr(D) gene variant and a catQ chloramphenicol acetyltransferase gene, was completely different from the genetic elements carrying other mef genes in pneumococci. This is the first report demonstrating catQ in S. pneumoniae and showing its linkage with a mef gene. Analysis of the chromosomal region beyond the left junction revealed an organization more similar to that of S. pneumoniae strain TIGR4 than to that of strain R6. The 5216IQ complex was apparently nonmobile, with no detectable transfer of erythromycin resistance being obtained in repeated transformation and conjugation assays.

Indexed as

Anti-Bacterial AgentsChloramphenicol ResistanceDNA, BacterialDNA Transposable ElementsDrug Resistance, BacterialErythromycinGene OrderGenes, BacterialMicrobial Sensitivity TestsMolecular Sequence DataOpen Reading FramesPolymerase Chain ReactionSequence Analysis, DNAStreptococcus pneumoniaeAnti-Bacterial AgentsDNA, BacterialDNA Transposable ElementsErythromycin

Identifiers

PMID17709462
PMCPMC2151433
OpenAlexW1972540342

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.