Evidence map›Paper›PMID 17709396›Full record

ArticleMolecular and cellular biology2007

Functional analysis of the transcription repressor PLU-1/JARID1B.

Angelo G Scibetta, Samantha Santangelo, Julia Coleman, Debbie Hall, Tracy Chaplin, John Copier, Steve Catchpole, Joy Burchell, Joyce Taylor-Papadimitriou

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 78 papers.

0numbers the graph read from it
0cells of the map it votes in
78citing papers in PubMed
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

78 citing papers in PubMed, 140 citations in OpenAlex.

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  18. The emerging role of KDM5A in human cancer.Journal of hematology & oncology · 2021
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  20. Review

18 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Angelo G ScibettaBreast Cancer Biology Group, King's College London School of Medicine, 3rd Floor, Thomas Guy House, Guy's Hospital, London SE1 9RT, United Kingdom.
Samantha Santangelo
Julia Coleman
Debbie Hall
Tracy Chaplin
John Copier
Steve Catchpole
Joy Burchell
Joyce Taylor-Papadimitriou
Guy's Hospital · GBKing's College London · GBCancer Research UK · GBSt George's Hospital · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The PLU-1/JARID1B nuclear protein, which is upregulated in breast cancers, belongs to the ARID family of DNA binding proteins and has strong transcriptional repression activity. To identify the target genes regulated by PLU-1/JARID1B, we overexpressed or silenced the human PLU-1/JARID1B gene in human mammary epithelial cells by using adenovirus and RNA interference systems, respectively, and then applied microarray analysis to identify candidate genes. A total of 100 genes showed inversely correlated differential expression in the two systems. Most of the candidate genes were downregulated by the overexpression of PLU-1/JARID1B, including the MT genes, the tumor suppressor gene BRCA1, and genes involved in the regulation of the M phase of the mitotic cell cycle. Chromatin immunoprecipitation assays confirmed that the metallothionein 1H (MT1H), -1F, and -1X genes are direct transcriptional targets of PLU-1/JARID1B in vivo. Furthermore, the level of trimethyl H3K4 of the MT1H promoter was increased following silencing of PLU-1/JARID1B. Both the PLU-1/JARID1B protein and the ARID domain selectively bound CG-rich DNA. The GCACA/C motif, which is abundant in metallothionein promoters, was identified as a consensus binding sequence of the PLU-1/JARID1B ARID domain. As expected from the microarray data, cells overexpressing PLU-1/JARID1B have an impaired G(2)/M checkpoint. Our study provides insight into the molecular function of the breast cancer-associated transcriptional repressor PLU-1/JARID1B.

Indexed as

Gene Expression RegulationTranscription, GeneticAnimalsBase SequenceBRCA1 ProteinCell CycleCells, CulturedDNA-Binding ProteinsEpithelial CellsGene Expression ProfilingGene SilencingHumansJumonji Domain-Containing Histone DemethylasesMammary Glands, HumanMetallothioneinMolecular Sequence DataBRCA1 ProteinDNA-Binding ProteinsJumonji Domain-Containing Histone DemethylasesKDM5B protein, humanMetallothioneinNuclear ProteinsRecombinant Fusion ProteinsRepressor Proteins

Identifiers

PMID17709396
PMCPMC2168894
OpenAlexW2160167945

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.