Evidence map›Paper›PMID 17709390›Full record

ArticleMolecular and cellular biology2007

Involvement of nuclear import and export factors in U8 box C/D snoRNP biogenesis.

Nicholas J Watkins, Ira Lemm, Reinhard Lührmann

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 46 citations in OpenAlex.

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  11. The circadian dynamics of small nucleolar RNA in the mouse liver.Journal of the Royal Society, Interface · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Nicholas J WatkinsInstitute for Cell and Molecular Biosciences, University of Newcastle, Newcastle upon Tyne NE2 4HH, United Kingdom. n.j.watkins@ncl.ac.uk
Ira Lemm
Reinhard Lührmann
Max Planck Institute for Biophysical Chemistry · DENewcastle University · GB

Funding

Biotechnology and Biological Sciences Research Council BB/C508069/1
6 · The paper itself

Abstract

Box C/D snoRNPs, factors essential for ribosome biogenesis, are proposed to be assembled in the nucleoplasm before localizing to the nucleolus. However, recent work demonstrated the involvement of nuclear export factors in this process, suggesting that export may take place. Here we show that there are distinct distributions of U8 pre-snoRNAs and pre-snoRNP complexes in HeLa cell nuclear and cytoplasmic extracts. We observed differential association of nuclear export (PHAX, CRM1, and Ran) factors with complexes in the two extracts, consistent with nucleocytoplasmic transport. Furthermore, we show that the U8 pre-snoRNA in one of the cytoplasmic complexes contains an m3G cap and is associated with the nuclear import factor Snurportin1. Using RNA interference, we show that loss of either PHAX or Snurportin1 results in the incorrect localization of the U8 snoRNA. Our data therefore show that nuclear export and import factors are directly involved in U8 box C/D snoRNP biogenesis. The distinct distribution of U8 pre-snoRNP complexes between the two cellular compartments together with the association of both nuclear import and export factors with the precursor complex suggests that the mammalian U8 snoRNP is exported during biogenesis.

Indexed as

Active Transport, Cell NucleusAnimalsBase SequenceCell FractionationCell NucleusCytoplasmHeLa CellsHumansMolecular Sequence DataNucleocytoplasmic Transport ProteinsPhosphoproteinsReceptors, Cytoplasmic and NuclearRibonucleoproteins, Small NucleolarRNA Cap-Binding ProteinsRNA InterferenceNucleocytoplasmic Transport ProteinsPHAX protein, humanPhosphoproteinsReceptors, Cytoplasmic and NuclearRibonucleoproteins, Small NucleolarRNA Cap-Binding ProteinsSNUPN protein, human

Identifiers

PMID17709390
PMCPMC2168896
OpenAlexW2127640527

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.