Evidence map›Paper›PMID 17708745›Full record

ArticleThe Biochemical journal2007

Determination of protein regions responsible for interactions of amelogenin with CD63 and LAMP1.

YanMing Zou, HongJun Wang, Jason L Shapiro, Curtis T Okamoto, Steven J Brookes, S Petter Lyngstadaas, Malcolm L Snead, Michael L Paine

Open access · bronzeAbstract read
In one paragraph

Article in The Biochemical journal, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
  2. Ameloblastin and its multifunctionality in amelogenesis: A review.Matrix biology : journal of the International Society for Matrix Biology · 2024
    Review
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  11. Adaptor protein complex 2-mediated, clathrin-dependent endocytosis, and related gene activities, are a prominent feature during maturation stage amelogenesis.Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research · 2013
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

YanMing ZouUniversity of Southern California School of Dentistry, Center for Craniofacial Molecular Biology, 2250 Alcazar Street, CSA Room 103, Los Angeles, CA 90033-1004, USA.
HongJun Wang
Jason L Shapiro
Curtis T Okamoto
Steven J Brookes
S Petter Lyngstadaas
Malcolm L Snead
Michael L Paine
University of Oslo · NO

Funding

DETERMINATION AND EXPRESSION OF AMELOGENIN GENE PRODUCTSR01DE006988 · NIDCR · UNIVERSITY OF SOUTHERN CALIFORNIA · PI SNEAD, MALCOLM L. · 1985 to 2012
$4.4M
ENAMEL MATRIX PROTEIN INTERACTIONR01DE013404 · NIDCR · UNIVERSITY OF SOUTHERN CALIFORNIA · PI PAINE, MICHAEL LANSDELL · 2000 to 2010
$3.5M
CELL AND GENETIC APPROACHES TO ENAMEL BIOMIMETICSR37DE013045 · NIDCR · UNIVERSITY OF SOUTHERN CALIFORNIA · PI SNEAD, MALCOLM L. · 2000 to 2007
$3.0M
CELL AND GENETICS APPROACHES TO ENAMEL BIOMIMETICSR01DE013045 · NIDCR · UNIVERSITY OF SOUTHERN CALIFORNIA · PI SNEAD, MALCOLM L. · 1998 to 2014
$1.9M
TIP39KDA AND TOOTH FORMATIONR01DE014867 · NIDCR · UNIVERSITY OF SOUTHERN CALIFORNIA · PI PAINE, MICHAEL LANSDELL · 2003 to 2007
$1.8M
NIDCR NIH HHS DE006988NIDCR NIH HHS DE013045NIDCR NIH HHS DE013404NIDCR NIH HHS DE014867NIDCR NIH HHS R01 DE006988NIDCR NIH HHS R01 DE013045NIDCR NIH HHS R01 DE013404NIDCR NIH HHS R01 DE014867NIDCR NIH HHS R37 DE013045
6 · The paper itself

Abstract

The enamel matrix protein amelogenin is secreted by ameloblasts into the extracellular space to guide the formation of highly ordered hydroxyapatite mineral crystallites, and, subsequently, is almost completely removed during mineral maturation. Amelogenin interacts with the transmembrane proteins CD63 and LAMP (lysosome-associated membrane protein) 1, which are involved in endocytosis. Exogenously added amelogenin has been observed to move rapidly into CD63/LAMP1-positive vesicles in cultured cells. In the present study, we demonstrate the protein region defined by amino acid residues 103-205 for CD63 interacts not only with amelogenin, but also with other enamel matrix proteins (ameloblastin and enamelin). A detailed characterization of binding regions in amelogenin, CD63 and LAMP1 reveals that the amelogenin region defined by residues PLSPILPELPLEAW is responsible for the interaction with CD63 through residues 165-205, with LAMP1 through residues 226-251, and with the related LAMP2 protein through residues 227-259. We predict that the amelogenin binding region is: (i) hydrophobic; (ii) largely disordered; and (iii) accessible to the external environment. In contrast, the binding region of CD63 is likely to be organized in a '7' shape within the mushroom-like structure of CD63 EC2 (extracellular domain 2). In vivo, the protein interactions between the secreted enamel matrix proteins with the membrane-bound proteins are likely to occur at the specialized secretory surfaces of ameloblast cells called Tomes' processes. Such protein-protein interactions may be required to establish short-term order of the forming matrix and/or to mediate feedback signals to the transcriptional machinery of ameloblasts and/or to remove matrix protein debris during enamel biomineralization.

Indexed as

AmelogeninAmino Acid SequenceAnimalsAntigens, CDBase SequenceBinding SitesDNA PrimersLysosomal-Associated Membrane Protein 1Lysosomal Membrane ProteinsMiceModels, MolecularMolecular Sequence DataPlatelet Membrane GlycoproteinsProtein ConformationSequence Homology, Amino AcidTetraspanin 30AmelogeninAntigens, CDCd63 protein, mouseDNA PrimersLamp1 protein, mouseLysosomal-Associated Membrane Protein 1Lysosomal Membrane ProteinsPlatelet Membrane GlycoproteinsTetraspanin 30

Identifiers

PMID17708745
PMCPMC2267358
OpenAlexW2080850129

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.