Evidence map›Paper›PMID 17705868›Full record

ArticleBMC immunology2007

Transcription factor network downstream of protease activated receptors (PARs) modulating mouse bladder inflammation.

Ricardo Saban, Cindy Simpson, Carole A Davis, Igor Dozmorov, Julie Maier, Ben Fowler, Michael A Ihnat, Robert E Hurst, Barry K Wershil, Marcia R Saban

Open access · goldAbstract read
In one paragraph

Article in BMC immunology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 14 citations in OpenAlex.

  1. Review
  2. Article
  3. TFEB and TFE3: Linking Lysosomes to Cellular Adaptation to Stress.Annual review of cell and developmental biology · 2016
    Review
  4. Article
  5. Article
  6. Article
  7. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Ricardo SabanDepartment of Physiology, The University Oklahoma Health Sciences Center, Oklahoma City, OK 73104, USA. ricardo-saban@ouhsc.edu
Cindy Simpson
Carole A Davis
Igor Dozmorov
Julie Maier
Ben Fowler
Michael A Ihnat
Robert E Hurst
Barry K Wershil
Marcia R Saban
University of Oklahoma Health Sciences Center · USOklahoma Medical Research Foundation · USChildren's Hospital at Montefiore · US

Funding

LPS-PEPTIDE INTERACTION IN BLADDER INFLAMMATIONR01DK055828 · NIDDK · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI SABAN, RICARDO · 1998 to 2007
$2.1M
Bladder transcriptome in experimental inflammationR01DK066101 · NIDDK · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI SABAN, RICARDO · 2003 to 2007
$1.3M
Bladder transcriptome in experimental inflammationR56DK066101 · NIDDK · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI SABAN, RICARDO · 2009 to 2009
$355k
NIDDK NIH HHS DK066101-01NIDDK NIH HHS DK 55828-01NIDDK NIH HHS R01 DK055828NIDDK NIH HHS R01 DK066101NIDDK NIH HHS R56 DK066101
6 · The paper itself

Abstract

backgroundAll four PARs are present in the urinary bladder, and their expression is altered during inflammation. In order to search for therapeutic targets other than the receptors themselves, we set forth to determine TFs downstream of PAR activation in the C57BL/6 urinary bladders.

methodsFor this purpose, we used a protein/DNA combo array containing 345 different TF consensus sequences. Next, the TF selected was validated by EMSA and IHC. As mast cells seem to play a fundamental role in bladder inflammation, we determined whether c-kit receptor deficient (Kit w/Kit w-v) mice have an abrogated response to PAR stimulation. Finally, TFEB antibody was used for CHIP/Q-PCR assay and revealed up-regulation of genes known to be downstream of TFEB.

resultsTFEB, a member of the MiTF family of basic helix-loop-helix leucine zipper, was the only TF commonly up-regulated by all PAR-APs. IHC results confirm a correlation between inflammation and TFEB expression in C57BL/6 mice. In contrast, Kit w/Kit w-v mice did not exhibit inflammation in response to PAR activation. EMSA results confirmed the increased TFEB binding activity in C57BL/6 but not in Kit w/Kit w-v mice.

conclusionThis is the first report describing the increased expression of TFEB in bladder inflammation in response to PAR activation. As TFEB belongs to a family of TFs essential for mast cell survival, our findings suggest that this molecule may influence the participation of mast cells in PAR-mediated inflammation and that targeting TFEB/MiTF activity may be a novel approach for the treatment of bladder inflammatory disorders.

Indexed as

Gene Regulatory NetworksAnimalsBasic Helix-Loop-Helix Leucine Zipper Transcription FactorsCystitisFemaleInflammationMast CellsMiceMice, Inbred C57BLMice, Mutant StrainsMucous MembraneReceptors, Proteinase-ActivatedUrinary BladderBasic Helix-Loop-Helix Leucine Zipper Transcription FactorsReceptors, Proteinase-ActivatedTcfeb protein, mouse

Identifiers

PMID17705868
PMCPMC2000913
OpenAlexW2165730042

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.