Evidence map›Paper›PMID 17699107›Full record

ArticleMolecular cancer research : MCR2007

Ataxia telangiectasia-mutated dependent DNA damage checkpoint functions regulate gene expression in human fibroblasts.

Tong Zhou, Jeff Chou, Yingchun Zhou, Dennis A Simpson, Feng Cao, Pierre R Bushel, Richard S Paules, William K Kaufmann

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cancer research : MCR, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.3field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Tong ZhouDepartment of Pathology and Laboratory Medicine, Center for Environmental Health and Susceptibility, CB#7295, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599-7295, USA.
Jeff Chou
Yingchun Zhou
Dennis A Simpson
Feng Cao
Pierre R Bushel
Richard S Paules
William K Kaufmann
University of North Carolina at Chapel Hill · USCenter for Environmental Health · USTriangle · USNational Institute of Environmental Health Sciences · US

Funding

UNC-CH CENTER FOR ENVIRONMENTAL HEALTH &SUSCEPTIBILITYP30ES010126 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Melissa A. Troester · 2001 to 2026
$36.3M
Microarray and Genome InformaticsZIAES102345 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI BUSHEL, ROBERT · 2009 to 2021
$10.8M
Profiles of Sucsceptibility to Toxicant StressU19ES011391 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI KAUFMANN, WILLIAM K · 2001 to 2007
$8.4M
Molecular Analysis Of Cell Cycle Control During CarcinogenesisZIAES021157 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI PAULES, RICHARD · 2009 to 2013
$5.1M
Microarray and Genome InformaticsZ01ES102345 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI BUSHEL, PIERRE · 2007 to 2008
$2.5M
Molecular Analysis Of Cell Cycle Control in CarcinogenesZ01ES021157 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI PAULES, RICHARD S · 1991 to 2008
$1.7M
Intramural NIH HHS Z01 ES021157NIEHS NIH HHS ES10126NIEHS NIH HHS ES11391NIEHS NIH HHS P30 ES010126NIEHS NIH HHS U19 ES011391
6 · The paper itself

Abstract

The relationships between profiles of global gene expression and DNA damage checkpoint functions were studied in cells from patients with ataxia telangiectasia (AT). Three telomerase-expressing AT fibroblast lines displayed the expected hypersensitivity to ionizing radiation (IR) and defects in DNA damage checkpoints. Profiles of global gene expression in AT cells were determined at 2, 6, and 24 h after treatment with 1.5-Gy IR or sham treatment and were compared with those previously recognized in normal human fibroblasts. Under basal conditions, 160 genes or expressed sequence tags were differentially expressed in AT and normal fibroblasts, and these were associated by gene ontology with insulin-like growth factor binding and regulation of cell growth. On DNA damage, 1,091 gene mRNAs were changed in at least two of the three AT cell lines. When compared with the 1,811 genes changed in normal human fibroblasts after the same treatment, 715 were found in both AT and normal fibroblasts, including most genes categorized by gene ontology into cell cycle, cell growth, and DNA damage response pathways. However, the IR-induced changes in these 715 genes in AT cells usually were delayed or attenuated in comparison with normal cells. The reduced change in DNA damage response genes and the attenuated repression of cell cycle-regulated genes may account for the defects in cell cycle checkpoint function in AT cells.

Indexed as

Gene Expression ProfilingRadiation, IonizingAtaxia Telangiectasia Mutated ProteinsBiomarkersCell CycleCell Cycle ProteinsCells, CulturedDNA-Binding ProteinsDNA DamageDose-Response Relationship, RadiationFibroblastsGene Expression RegulationHumansMutationOligonucleotide Array Sequence AnalysisProtein Serine-Threonine KinasesAtaxia Telangiectasia Mutated ProteinsATM protein, humanBiomarkersCell Cycle ProteinsDNA-Binding ProteinsProtein Serine-Threonine KinasesTumor Suppressor Proteins

Identifiers

PMID17699107
PMCPMC3607384
OpenAlexW2104292282

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.