Evidence map›Paper›PMID 17693507›Full record

ArticleJournal of bacteriology2007

Transcriptional regulation of stress response and motility functions in Helicobacter pylori is mediated by HspR and HrcA.

Davide Roncarati, Alberto Danielli, Gunther Spohn, Isabel Delany, Vincenzo Scarlato

Open access · greenAbstract readComparative Study
In one paragraph

Article in Journal of bacteriology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 50 citations in OpenAlex.

  1. ThemBio · 2025
    Article
  2. The Role ofInternational journal of molecular sciences · 2025
    Review
  3. Insights into the Orchestration of Gene Transcription Regulators inInternational journal of molecular sciences · 2022
    Review
  4. Feeling the Heat: TheBiomolecules · 2021
    Article
  5. Cells · 2020
    Review
  6. Review
  7. Cooperative Regulation ofMicroorganisms · 2020
    Article
  8. TheMicroorganisms · 2020
    Article
  9. Microorganisms · 2019
    Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Review
  15. TheFrontiers in microbiology · 2018
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Davide RoncaratiDepartment of Biology, University of Bologna, Via Selmi 3, 40126, Bologna, Italy.
Alberto Danielli
Gunther Spohn
Isabel Delany
Vincenzo Scarlato
University of Bologna · ITNovartis (Italy) · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The hrcA and hspR genes of Helicobacter pylori encode two transcriptional repressor proteins that negatively regulate expression of the groES-groEL and hrcA-grpE-dnaK operons. While HspR was previously shown to bind far upstream of the promoters transcribing these operons, the binding sites of HrcA were not identified. Here, we demonstrate by footprinting analysis that HrcA binds to operator elements similar to the so-called CIRCE sequences overlapping both promoters. Binding of HspR and HrcA to their respective operators occurs in an independent manner, but the DNA binding activity of HrcA is increased in the presence of GroESL, suggesting that the GroE chaperonin system corepresses transcription together with HrcA. Comparative transcriptome analysis of the wild-type strain and hspR and hrcA singly and doubly deficient strains revealed that a set of 14 genes is negatively regulated by the action of one or both regulators, while a set of 29 genes is positively regulated. While both positive and negative regulation of transcription by HspR and/or HrcA could be confirmed by RNA primer extension analyses for two representative genes, binding of either regulator to the promoters could not be detected, indicating that transcriptional regulation at these promoters involves indirect mechanisms. Strikingly, 14 of the 29 genes which were found to be positively regulated by HspR or HrcA code for proteins involved in flagellar biosynthesis. Accordingly, loss of motility functions was observed for HspR and HrcA single or double mutants. The possible regulatory intersections of the heat shock response and flagellar assembly are discussed.

Indexed as

Bacterial ProteinsBase SequenceBinding SitesDNA, BacterialDNA FootprintingFlagellaGene DeletionGene Expression ProfilingGene Expression Regulation, BacterialHeat-Shock ProteinsHelicobacter pyloriLocomotionMolecular Sequence DataOligonucleotide Array Sequence AnalysisOperonPromoter Regions, GeneticBacterial ProteinsDNA, BacterialHeat-Shock ProteinsHspR protein, bacteriaRepressor Proteins

Identifiers

PMID17693507
PMCPMC2168435
OpenAlexW2128467964

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.