Evidence map›Paper›PMID 17691822›Full record

ArticleBiochemistry2007

Insights into the solution structure of human deoxyhemoglobin in the absence and presence of an allosteric effector.

Sarata C Sahu, Virgil Simplaceanu, Qingguo Gong, Nancy T Ho, Fang Tian, James H Prestegard, Chien Ho

Open access · greenAbstract readComparative Study
In one paragraph

Article in Biochemistry, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.0field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 30 citations in OpenAlex.

  1. Hemoglobin: Structure, Function and Allostery.Sub-cellular biochemistry · 2020
    Review
  2. Article
  3. Article
  4. Modulation of hemoglobin dynamics by an allosteric effector.Protein science : a publication of the Protein Society · 2017
    Article
  5. New look at hemoglobin allostery.Chemical reviews · 2015
    Review
  6. Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Sarata C SahuDepartment of Biological Sciences, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213, USA.
Virgil Simplaceanu
Qingguo Gong
Nancy T Ho
Fang Tian
James H Prestegard
Chien Ho
Carnegie Mellon University · USUniversity of Georgia · US

Funding

Southeast Collaboratory for High-Field Biomolecular NMRP41GM066340 · NIGMS · UNIVERSITY OF GEORGIA (UGA) · PI PRESTEGARD, JAMES H · 2002 to 2006
$5.5M
PHYSICAL-CHEMICAL STUDY OF HEMOGLOBIN AND ERYTHROCYTER01HL024525 · NHLBI · CARNEGIE-MELLON UNIVERSITY · PI HO, CHIEN · 1985 to 2005
$4.0M
Cryoprobe for 600 MHz Biomolecular NMRS10RR017815 · NCRR · CARNEGIE-MELLON UNIVERSITY · PI RULE, GORDON S. · 2003 to 2003
$239k
NCRR NIH HHS S10RR-017815NHLBI NIH HHS R01 HL024525NHLBI NIH HHS R01HL-024525NIGMS NIH HHS P41 GM066340NIGMS NIH HHS P41GM066340
6 · The paper itself

Abstract

We present a nuclear magnetic resonance (NMR) study in solution of the structures of human normal hemoglobin (Hb A) in the deoxy or unligated form in the absence and presence of an allosteric effector, inositol hexaphosphate (IHP), using 15N-1H residual dipolar coupling (RDC) measurements. There are several published crystal structures for deoxyhemoglobin A (deoxy-Hb A), and it has been reported that the functional properties of Hb A in single crystals are different from those in solution. Carbonmonoxyhemoglobin A (HbCO A) can also be crystallized in several structures. Our recent RDC studies of HbCO A in the absence and presence of IHP have shown that the solution structure of this Hb molecule is distinctly different from its classical crystal structures (R and R2). To have a better understanding of the structure-function relationship of Hb A under physiological conditions, we need to evaluate its structures in both ligated and unligated states in solution. Here, the intrinsic paramagnetic property of deoxy-Hb A has been exploited for the measurement of RDCs using the magnetic-field dependence of the apparent one-bond 1H-15N J couplings. Our RDC analysis suggests that the quaternary and tertiary structures of deoxy-Hb A in solution differ from its recently determined high-resolution crystal structures. Upon binding of IHP, structural changes in deoxy-Hb A are also observed, and these changes are largely within the alpha1beta1 (or alpha2beta2) dimer itself. These new structural findings allow us to gain a deeper insight into the structure-function relationship of this interesting allosteric protein.

Indexed as

Allosteric SiteAllosteric RegulationCrystallizationCrystallography, X-RayHemoglobin AHemoglobinsHumansModels, MolecularNuclear Magnetic Resonance, BiomolecularOxygenPhytic AcidProtein Structure, QuaternaryProtein Structure, TertiarySolutionsStructure-Activity RelationshipdeoxyhemoglobinHemoglobin AHemoglobinsOxygenPhytic AcidSolutions

Identifiers

PMID17691822
PMCPMC2532491
OpenAlexW2013238742

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.