Evidence map›Paper›PMID 17690690›Full record

ArticleThe EMBO journal2007

Structural insights into the transcriptional and translational roles of Ebp1.

Tom P Monie, Andrew J Perrin, James R Birtley, Trevor R Sweeney, Ioannis Karakasiliotis, Yasmin Chaudhry, Lisa O Roberts, Stephen Matthews, Ian G Goodfellow, Stephen Curry

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 67 papers.

0numbers the graph read from it
0cells of the map it votes in
67citing papers in PubMed
4.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

67 citing papers in PubMed, 102 citations in OpenAlex.

  1. Review
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7 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Tom P MonieDivision of Cell and Molecular Biology, Imperial College, South Kensington Campus, London, UK.
Andrew J Perrin
James R Birtley
Trevor R Sweeney
Ioannis Karakasiliotis
Yasmin Chaudhry
Lisa O Roberts
Stephen Matthews
Ian G Goodfellow
Stephen Curry
Imperial College London · GBUniversity of Surrey · GB

Funding

Wellcome Trust 081624Wellcome Trust 085464
6 · The paper itself

Abstract

The ErbB3-binding protein 1 (Ebp1) is an important regulator of transcription, affecting eukaryotic cell growth, proliferation, differentiation and survival. Ebp1 can also affect translation and cooperates with the polypyrimidine tract-binding protein (PTB) to stimulate the activity of the internal ribosome entry site (IRES) of foot-and-mouth disease virus (FMDV). We report here the crystal structure of murine Ebp1 (p48 isoform), providing the first glimpse of the architecture of this versatile regulator. The structure reveals a core domain that is homologous to methionine aminopeptidases, coupled to a C-terminal extension that contains important motifs for binding proteins and RNA. It sheds new light on the conformational differences between the p42 and p48 isoforms of Ebp1, the disposition of the key protein-interacting motif ((354)LKALL(358)) and the RNA-binding activity of Ebp1. We show that the primary RNA-binding site is formed by a Lys-rich motif in the C terminus and mediates the interaction with the FMDV IRES. We also demonstrate a specific functional requirement for Ebp1 in FMDV IRES-directed translation that is independent of a direct interaction with PTB.

Indexed as

Models, MolecularAdaptor Proteins, Signal TransducingAminopeptidasesBinding SitesFoot-and-Mouth Disease VirusLysineMethionyl AminopeptidasesProtein BiosynthesisProtein ConformationProtein IsoformsRNA, Small InterferingRNA, ViralTranscriptional ActivationAdaptor Proteins, Signal TransducingAminopeptidasesLysineMethionyl AminopeptidasesProtein IsoformsRNA, Small InterferingRNA, Viral

Identifiers

PMID17690690
PMCPMC1994118
OpenAlexW2056325595

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.