Evidence map›Paper›PMID 17690247›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2007

Meiotic crossover hotspots contained in haplotype block boundaries of the mouse genome.

Liisa Kauppi, Maria Jasin, Scott Keeney

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
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  8. Isolation of meiotic recombinants from mouse sperm.Methods in molecular biology (Clifton, N.J.) · 2011
    Article
  9. Article
  10. Anatomy of mouse recombination hot spots.Nucleic acids research · 2010
    Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Liisa KauppiMolecular Biology and Developmental Biology Programs, Memorial Sloan-Kettering Cancer Center, 1275 York Avenue, New York, NY 10021, USA. kauppil@mskcc.org
Maria Jasin
Scott Keeney
Molecular Biology Consortium · USMemorial Sloan Kettering Cancer Center · US

Funding

Role of Spo11 and recombination in mouse meiosisR01HD040916 · NICHD · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI JASIN, MARIA · 2001 to 2011
$5.4M
NICHD NIH HHS HD 40916NICHD NIH HHS R01 HD040916
6 · The paper itself

Abstract

Fertility requires successful chromosome segregation in meiosis, which in most sexual organisms depends on the formation of appropriately placed crossovers. The nonrandom genome-wide distributions of meiotic recombination events have been examined at the molecular level experimentally in yeast and by inference from linkage disequilibrium patterns in humans. Thus far, no method has existed for pinpointing sites of crossing-over on a genome-wide scale in an experimentally tractable animal whose genome size and complexity models that of humans. Here, we present a genomic approach to identify mouse crossover hotspots, based on targeting haplotype block boundaries. This represents a previously undescribed method potentially applicable to large-scale mouse hotspot identification. Using this method, we have successfully predicted the location of two previously uncharacterized crossover hotspots in male mice. As increasing amounts of single-nucleotide polymorphism data emerge, this approach will be useful for investigating the recombination landscape of the mouse genome.

Indexed as

GenomeHaplotypesAnimalsCross-Over StudiesLinkage DisequilibriumMaleMeiosisMicePolymorphism, Single NucleotideSpermatozoa

Identifiers

PMID17690247
PMCPMC1948908
OpenAlexW1967914765

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.