Evidence map›Paper›PMID 17681875›Full record

ReviewOral oncology2008

Chromosomal imbalances in oral squamous cell carcinoma: examination of 31 cell lines and review of the literature.

Christa Lese Martin, Shalini C Reshmi, Thomas Ried, William Gottberg, John W Wilson, Jaya K Reddy, Poornima Khanna, Jonas T Johnson, Eugene N Myers, Susanne M Gollin

Abstract readReview
In one paragraph

Review in Oral oncology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed.

  1. Review
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  10. Review
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  14. Review
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  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Christa Lese MartinDepartment of Human Genetics, University of Pittsburgh, Graduate School of Public Health, 130 DeSoto Street, Pittsburgh, PA 15261, United States.
Shalini C Reshmi
Thomas Ried
William Gottberg
John W Wilson
Jaya K Reddy
Poornima Khanna
Jonas T Johnson
Eugene N Myers
Susanne M Gollin

Funding

VECTOR CORE FACILITYP30CA047904 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Jessie Nedrow · 1988 to 2026
$158.0M
University of Pittsburgh Clinical and Translational Science InstituteUL1TR000005 · NCATS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI REIS, STEVEN E · 2012 to 2015
$50.8M
WILD TYPE P53-BASED ADJUVANT IMMUNOTHERAPY FOR SCCHNP50CA097190 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI CHRISTOPHER J. BAKKENIST · 2004 to 2026
$49.6M
TNF FAMILY LIGANDS AND ORAL CARCINOMAP60DE013059 · NIDCR · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI MYERS, EUGENE N · 1999 to 2003
$9.7M
Origin of Spindle Multipolarity in Oral Cancer CellsR01DE016086 · NIDCR · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI SAUNDERS, WILLIAM · 2004 to 2015
$3.6M
Characterization of the 11q13 Amplicon in Oral CancerR01DE014729 · NIDCR · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI GOLLIN, SUSANNE M · 2002 to 2006
$1.7M
Identifying Diagnostic Markers for Cervical Cancer, Breast Cancer, and Prostate Z01BC010834 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI RIED, THOMAS · 2007 to 2008
$1.3M
Cancer proteomicsZ01BC010836 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI RIED, THOMAS · 2007 to 2008
$1.1M
GENETIC ANALYSIS OF ORAL PRENEOPLASIA AND CARCINOMAR01DE010513 · NIDCR · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI GOLLIN, SUSANNE M · 1994 to 1996
–
NCATS NIH HHS UL1 TR000005NCI NIH HHS P30 CA047904NCI NIH HHS P30CA47904NCI NIH HHS P50 CA097190NIDCR NIH HHS P60 DE013059NIDCR NIH HHS P60DE13059NIDCR NIH HHS R01 DE010513NIDCR NIH HHS R01 DE014729NIDCR NIH HHS R01 DE016086NIDCR NIH HHS R01DE016086NIDCR NIH HHS R01DE10513NIDCR NIH HHS R01DE14729
6 · The paper itself

Abstract

Classical and molecular cytogenetic analysis, including fluorescence in situ hybridization (FISH) and chromosomal comparative genomic hybridization (CGH), were used to examine genetic changes involved in the development and/or progression of oral squamous cell carcinoma (OSCC). Of 31 OSCC cell lines studied, more than one-third expressed clonal structural abnormalities involving chromosomes 3, 7, 8, 9, and 11. Eleven OSCC cell lines were evaluated using CGH to identify novel genome-wide gains, losses, or amplifications. By CGH, more than half of the cell lines showed loss of 3p, gain of 3q, 8q, and 20q. Further, molecular cytogenetic analyses by FISH of primary tumors showed that the karyotypes of cell lines derived from those tumors correlated with specific gains and losses in the tumors from which they were derived. The most frequent nonrandom aberration identified by both karyotype and CGH analyses was amplification of chromosomal band 11q13 in the form of a homogeneously staining region. Our data suggest that loss of 9p and 11q13 amplification may be of prognostic benefit in the management of OSCC, which is consistent with the literature. The results of this study validate the relationship between these OSCC cell lines and the tumors from which they were derived. The results also emphasize the usefulness of these cell lines as in vitro experimental models and provide important genetic information on these OSCC cell lines that were recently reported in this journal.

Indexed as

Chromosome AberrationsAdolescentAdultAgedAged, 80 and overCarcinoma, Squamous CellChromosomes, Human, Pair 11FemaleHumansIn Situ Hybridization, FluorescenceKaryotypingMaleMiddle AgedMouth NeoplasmsNeoplasm StagingNucleic Acid Hybridization

Identifiers

PMID17681875
PMCPMC2362065

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.