ReviewPLoS computational biology2007
Quantitative analysis of cell nucleus organisation.
Review in PLoS computational biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
10 citing papers in PubMed.
- Influence of microgravity on spontaneous calcium activity of primary hippocampal neurons grown in microfluidic chips.NPJ microgravity · 2024Article
- Multi-scale phase separation by explosive percolation with single-chromatin loop resolution.Computational and structural biotechnology journal · 2022Article
- Spatial modeling of biological patterns shows multiscale organization of Arabidopsis thaliana heterochromatin.Scientific reports · 2021Article
- New quantitative approaches reveal the spatial preference of nuclear compartments in mammalian fibroblasts.Journal of the Royal Society, Interface · 2015Article
- Transcription sites are developmentally regulated during the asexual cycle of Plasmodium falciparum.PloS one · 2013Article
- Analysis of spatial point patterns in nuclear biology.PloS one · 2012Article
- Measuring topology of low-intensity DNA methylation sites for high-throughput assessment of epigenetic drug-induced effects in cancer cells.Experimental cell research · 2010Article
- Statistical analysis of 3D images detects regular spatial distributions of centromeres and chromocenters in animal and plant nuclei.PLoS computational biology · 2010Article
- Segmentation of fluorescence microscopy images for quantitative analysis of cell nuclear architecture.Biophysical journal · 2009Article
- Spatial quantitative analysis of fluorescently labeled nuclear structures: problems, methods, pitfalls.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2008Review
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
5 authors.
Funding
Abstract
There are almost 1,300 entries for higher eukaryotes in the Nuclear Protein Database. The proteins' subcellular distribution patterns within interphase nuclei can be complex, ranging from diffuse to punctate or microspeckled, yet they all work together in a coordinated and controlled manner within the three-dimensional confines of the nuclear volume. In this review we describe recent advances in the use of quantitative methods to understand nuclear spatial organisation and discuss some of the practical applications resulting from this work.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.