Evidence map›Paper›PMID 17675405›Full record

ArticleThe Plant cell2007

A downstream mediator in the growth repression limb of the jasmonate pathway.

Yuanxin Yan, Stéphanie Stolz, Aurore Chételat, Philippe Reymond, Marco Pagni, Lucie Dubugnon, Edward E Farmer

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 352 papers.

0numbers the graph read from it
0cells of the map it votes in
352citing papers in PubMed
42.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

352 citing papers in PubMed, 705 citations in OpenAlex.

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  17. Genome-Wide Characterization of thePlants (Basel, Switzerland) · 2025
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  19. Plants (Basel, Switzerland) · 2025
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292 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Yuanxin YanDepartment of Plant Molecular Biology, University of Lausane, Biophore, CH-1015 Lausane, Switzerland.
Stéphanie Stolz
Aurore Chételat
Philippe Reymond
Marco Pagni
Lucie Dubugnon
Edward E Farmer
University of Lausanne · CHSIB Swiss Institute of Bioinformatics · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Wounding plant tissues initiates large-scale changes in transcription coupled to growth arrest, allowing resource diversion for defense. These processes are mediated in large part by the potent lipid regulator jasmonic acid (JA). Genes selected from a list of wound-inducible transcripts regulated by the jasmonate pathway were overexpressed in Arabidopsis thaliana, and the transgenic plants were then assayed for sensitivity to methyl jasmonate (MeJA). When grown in the presence of MeJA, the roots of plants overexpressing a gene of unknown function were longer than those of wild-type plants. When transcript levels for this gene, which we named JASMONATE-ASSOCIATED1 (JAS1), were reduced by RNA interference, the plants showed increased sensitivity to MeJA and growth was inhibited. These gain- and loss-of-function assays suggest that this gene acts as a repressor of JA-inhibited growth. An alternative transcript from the gene encoding a second protein isoform with a longer C terminus failed to repress jasmonate sensitivity. This identified a conserved C-terminal sequence in JAS1 and related genes, all of which also contain Zim motifs and many of which are jasmonate-regulated. Both forms of JAS1 were found to localize to the nucleus in transient expression assays. Physiological tests of growth responses after wounding were consistent with the fact that JAS1 is a repressor of JA-regulated growth retardation.

Indexed as

Amino Acid SequenceArabidopsisArabidopsis ProteinsCyclopentanesGene Expression Regulation, PlantGenes, PlantMolecular Sequence DataNuclear ProteinsOligonucleotide Array Sequence AnalysisOxylipinsPlants, Genetically ModifiedProtein IsoformsProtein TransportRepressor ProteinsRNA InterferenceRNA, MessengerArabidopsis ProteinsCyclopentanesJAS1 protein, Arabidopsisjasmonic acidNuclear ProteinsOxylipinsProtein IsoformsRepressor ProteinsRNA, Messenger

Identifiers

PMID17675405
PMCPMC2002611
OpenAlexW1964741545

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.