Evidence map›Paper›PMID 17675349›Full record

ArticleBiophysical journal2007

Eavesdropping on the social lives of Ca(2+) sparks.

Leighton T Izu, Tamás Bányász, C William Balke, Ye Chen-Izu

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.3field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

  1. Late CaCirculation research · 2018
    Article
  2. Article
  3. Article
  4. Article
  5. Calcium alternans in cardiac myocytes: order from disorder.Journal of molecular and cellular cardiology · 2013
    Review
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Leighton T IzuDepartment of Internal Medicine, University of Kentucky College of Medicine, Lexington, Kentucky, USA. leightonizu@uky.edu
Tamás Bányász
C William Balke
Ye Chen-Izu
University of Kentucky · USUniversity of Debrecen · HU

Funding

Mechanisms of E-C Coupling in Atrial CellsR01HL071865 · NHLBI · UNIVERSITY OF MARYLAND BALTIMORE · PI BALKE, C WILLIAM · 2003 to 2006
$1.5M
Calcium Waves in Atrial CellsK25HL068704 · NHLBI · UNIVERSITY OF MARYLAND BALTIMORE · PI IZU, LEIGHTON T. · 2002 to 2005
$529k
NHLBI NIH HHS K25 HL068704NHLBI NIH HHS K25HL068704NHLBI NIH HHS R01 HL071865NHLBI NIH HHS R01HL071865
6 · The paper itself

Abstract

Ca(2+) sparks arise from the stochastic opening of spatially discrete clusters of ryanodine receptors called a Ca(2+) release unit (CRU). If the RyR clusters were not spatially separated, then Ca(2+) released from one RyR would immediately diffuse to its neighbor and lead to uncontrolled, runaway Ca(2+) release throughout the cell. While physical separation provides some isolation from neighbors, CRUs are not incommunicado. When inter-neighbor interactions become large enough, Ca(2+) waves spontaneously emerge. A more circumscribed interaction shows up in high-speed two-dimensional confocal images as jumping Ca(2+) sparks that seem to be sequentially activated along the Z-line and across Z-lines. However, since Ca(2+) sparks are stochastic events how can we tell whether two sparks occurring close together in space and time are causally related or appeared simply by coincidence? Here we develop a mathematical method to disentangle cause and coincidence in a statistical sense. From our analysis we derive three fundamental properties of Ca(2+) spark generation: 1), the "intrinsic" spark frequency, the spark frequency one would observe if the CRUs were incommunicado; 2), the coupling strength, which measures how strongly one CRU affects another; and 3), the range over which the communication occurs. These parameters allow us to measure the effect RyR regulators have on the intrinsic activity of CRUs and on the coupling between them.

Indexed as

AnimalsBiophysicsCalciumComputer SimulationDiffusionHeart VentriclesMaleMicroscopy, ConfocalModels, StatisticalModels, TheoreticalRatsRats, Sprague-DawleyRyanodine Receptor Calcium Release ChannelSodiumStochastic ProcessesCalciumRyanodine Receptor Calcium Release ChannelSodium

Identifiers

PMID17675349
PMCPMC2072070
OpenAlexW2059351239

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.