Evidence map›Paper›PMID 17673910›Full record

ArticleThe EMBO journal2007

Structural and functional characterization of a novel type of ligand-independent RXR-USP receptor.

Thomas Iwema, Isabelle M L Billas, Yannick Beck, François Bonneton, Hélène Nierengarten, Arnaud Chaumot, Geoff Richards, Vincent Laudet, Dino Moras

Open access · greenAbstract read
In one paragraph

Article in The EMBO journal, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
5.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 129 citations in OpenAlex.

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  19. The retinoid X receptors and their ligands.Biochimica et biophysica acta · 2012
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Thomas IwemaIGBMC (Institut de Génétique et de Biologie Moléculaire et Cellulaire), UMR7104 CNRS, U596 INSERM, ULP, Département de Biologie et de Génomique Structurales, Illkirch, France.
Isabelle M L Billas
Yannick Beck
François Bonneton
Hélène Nierengarten
Arnaud Chaumot
Geoff Richards
Vincent Laudet
Dino Moras
Institut de génétique et de biologie moléculaire et cellulaire · FRÉcole Normale Supérieure de Lyon · FRInternational Human Frontier Science Program Organization · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Retinoid X receptor (RXR) and Ultraspiracle (USP) play a central role as ubiquitous heterodimerization partners of many nuclear receptors. While it has long been accepted that a wide range of ligands can activate vertebrate/mollusc RXRs, the existence and necessity of specific endogenous ligands activating RXR-USP in vivo is still matter of intense debate. Here we report the existence of a novel type of RXR-USP with a ligand-independent functional conformation. Our studies involved Tribolium USP (TcUSP) as representative of most arthropod RXR-USPs, with high sequence homology to vertebrate/mollusc RXRs. The crystal structure of the ligand-binding domain of TcUSP was solved in the context of the functional heterodimer with the ecdysone receptor (EcR). While EcR exhibits a canonical ligand-bound conformation, USP adopts an original apo structure. Our functional data demonstrate that TcUSP is a constitutively silent partner of EcR, and that none of the RXR ligands can bind and activate TcUSP. These findings together with a phylogenetic analysis suggest that RXR-USPs have undergone remarkable functional shifts during evolution and give insight into receptor-ligand binding evolution and dynamics.

Indexed as

Protein Structure, QuaternaryAnimalsAnimals, Genetically ModifiedBinding SitesDimerizationDNA-Binding ProteinsDrosophila melanogasterDrosophila ProteinsEvolution, MolecularGenes, ReporterHumansInsect ProteinsLigandsModels, MolecularMolecular Sequence DataPhylogenyDNA-Binding ProteinsDrosophila Proteinsecdysone receptorInsect ProteinsLigandsReceptors, SteroidRetinoid X Receptor alphaTranscription FactorsUSP protein, Drosophila

Identifiers

PMID17673910
PMCPMC1952225
OpenAlexW2161421738

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.