Evidence map›Paper›PMID 17673297›Full record

ArticleJournal of inorganic biochemistry2007

Probing the cytochrome c' folding landscape.

Ekaterina V Pletneva, Ziqing Zhao, Tetsunari Kimura, Krastina V Petrova, Harry B Gray, Jay R Winkler

Abstract read
In one paragraph

Article in Journal of inorganic biochemistry, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Intrachain contact dynamics in unfolded cytochrome cb562.The journal of physical chemistry. B · 2013
    Article
  3. Article
  4. Folding energy landscape of cytochrome cb562.Proceedings of the National Academy of Sciences of the United States of America · 2009
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Ekaterina V PletnevaBeckman Institute, California Institute of Technology, 1200 E. California Blvd., Pasadena, CA 91125, USA.
Ziqing Zhao
Tetsunari Kimura
Krastina V Petrova
Harry B Gray
Jay R Winkler

Funding

Elucidating Protein Folding MechanismsR01GM068461 · NIGMS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI WINKLER, JAY R · 2003 to 2010
$2.2M
NIGMS NIH HHS R01 GM068461PHS HHS GN068461
6 · The paper itself

Abstract

The folding kinetics of R. palustris cytochrome c' (cyt c') have been monitored by heme absorption and native Trp72 fluorescence at pH 5. The Trp72 fluorescence burst signal suggests early compaction of the polypeptide ensemble. Analysis of heme transient absorption spectra reveals deviations from two-state behavior, including a prominent slow phase that is accelerated by the prolyl isomerase cyclophilin. A nonnative proline configuration (Pro21) likely interferes with the formation of the helical bundle surrounding the heme.

Indexed as

Protein FoldingCyclophilinsCytochromes c'FluorescenceHumansHydrogen-Ion ConcentrationKineticsProtein Structure, SecondaryRhodopseudomonasThermodynamicsCyclophilinsCytochromes c'

Identifiers

PMID17673297
PMCPMC2110879

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.