Evidence map›Paper›PMID 17672902›Full record

ArticleBMC medical genetics2007

Subarachnoid hemorrhage: tests of association with apolipoprotein E and elastin genes.

Ritesh Kaushal, Daniel Woo, Prodipto Pal, Mary Haverbusch, Huifeng Xi, Charles Moomaw, Padmini Sekar, Brett Kissela, Dawn Kleindorfer, Matthew Flaherty and 4 more

Registry-linked trialOpen access · goldAbstract read
In one paragraph

Article in BMC medical genetics, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT00682695 (Genetic and Environmental Risk Factors for Hemorrhagic Stroke), which is not on this map. Cited by 9 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 1 pooled it
1.1field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT00682695 recruitingnot on this mapstarted 2025, after this paper: background citation

Genetic and Environmental Risk Factors for Hemorrhagic Stroke

TypeobservationalSponsorState University of New York at BuffaloRan2025 to 2029Enrolled1,000ConditionsStroke
3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 1 synthesis or guideline pooled it, 23 citations in OpenAlex.

  1. Pooled it
  2. LD-informed deep learning for Alzheimer's gene loci detection using WGS data.medRxiv : the preprint server for health sciences · 2024
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Ritesh KaushalDepartment of Environmental Health, Center for Genome Information, University of Cincinnati, Cincinnati, Ohio, USA. rit.kau@gmail.com
Daniel Woo
Prodipto Pal
Mary Haverbusch
Huifeng Xi
Charles Moomaw
Padmini Sekar
Brett Kissela
Dawn Kleindorfer
Matthew Flaherty
Laura Sauerbeck
Ranajit Chakraborty
Joseph Broderick
Ranjan Deka
University of Cincinnati Medical Center · USUniversity of Cincinnati · USCincinnati Health Department · US

Funding

REPRODUCTIVE AND DEVELOPMENTAL TOXICOLOGY RESEARCHP30ES006096 · NIEHS · UNIVERSITY OF CINCINNATI · PI YADAV, JAGJIT S · 1992 to 2022
$35.4M
STROKE INCIDENCE AND OUTCOME AMONG BLACKS AND WHITESR01NS030678 · NINDS · UNIVERSITY OF CINCINNATI · PI KISSELA, BRETT M, KLEINDORFER, DAWN O · 1993 to 2024
$26.7M
Genetic&Environment Risk Factors for Hemorrhagic StrokeR01NS036695 · NINDS · UNIVERSITY OF CINCINNATI · PI WOO, DANIEL · 1997 to 2012
$14.1M
NIEHS NIH HHS P30 ES006096NIEHS NIH HHS R01-ES06096NINDS NIH HHS R01 NS030678NINDS NIH HHS R01 NS036695NINDS NIH HHS R01-NS30678NINDS NIH HHS R01-NS36695
6 · The paper itself

Abstract

backgroundApolipoprotein E (APOE) and elastin (ELN) are plausible candidate genes involved in the pathogenesis of stroke. We tested for association of variants in APOE and ELN with subarachnoid hemorrhage (SAH) in a population-based study. We genotyped 12 single nucleotide polymorphisms (SNPs) on APOE and 10 SNPs on ELN in a sample of 309 Caucasian individuals, of whom 107 are SAH cases and 202 are age-, race-, and gender-matched controls from the Greater Cincinnati/Northern Kentucky region. Associations were tested at genotype, allele, and haplotype levels. A genomic control analysis was performed to check for spurious associations resulting from population substructure.

resultsAt the APOE locus, no individual SNP was associated with SAH after correction for multiple comparisons. Haplotype analysis revealed significant association of the major haplotype (Hap1) in APOE with SAH (p = 0.001). The association stemmed from both the 5' promoter and the 3' region of the APOE gene. APOE epsilon2 and epsilon 4 were not significantly associated with SAH. No association was observed for ELN at genotype, allele, or haplotype level and our study failed to confirm previous reports of ELN association with aneurysmal SAH.

conclusionThis study suggests a role of the APOE gene in the etiology of aneurysmal SAH.

Indexed as

AdultApolipoproteins ECase-Control StudiesElastinFemaleGene FrequencyGenetic Predisposition to DiseaseGenetic VariationHumansMaleMiddle AgedPolymorphism, Single NucleotideSequence Analysis, DNASubarachnoid HemorrhageApolipoproteins EElastin

Identifiers

PMID17672902
PMCPMC1950089
OpenAlexW2007037434

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.