Evidence map›Paper›PMID 17669417›Full record

ArticleJournal of immunological methods2007

Characterization of phage peptide interaction with antibody using phage mediated immuno-PCR.

Xiaoli Yu, Mark P Burgoon, Andrew J Shearer, Donald H Gilden

Open access · greenAbstract read
In one paragraph

Article in Journal of immunological methods, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 24 citations in OpenAlex.

  1. Trial
  2. Antibodies from Multiple Sclerosis Brain Identified Epstein-Barr Virus Nuclear Antigen 1 & 2 Epitopes which Are Recognized by Oligoclonal Bands.Journal of neuroimmune pharmacology : the official journal of the Society on NeuroImmune Pharmacology · 2021
    Article
  3. Article
  4. Quantitative PCR of T7 Bacteriophage from Biopanning.Journal of visualized experiments : JoVE · 2018
    Article
  5. Article
  6. Article
  7. Viruses and multiple sclerosis.The Neuroscientist : a review journal bringing neurobiology, neurology and psychiatry · 2011
    Review
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Xiaoli YuDepartment of Neurology, University of Colorado Health Sciences Center, 4200 E. 9th Avenue, Mail Stop B182, Denver, Colorado 80262, USA. xiaoli.yu@uchse.edu
Mark P Burgoon
Andrew J Shearer
Donald H Gilden
University of Colorado Health · US

Funding

Varicella Zoster Virus Latency in Human GangliaP01NS032623 · NINDS · UNIVERSITY OF COLORADO DENVER · PI MAHLAINGAM, RAVI · 1993 to 2008
$12.3M
Antigen Identification in Inflammatory CNS DiseaseR01NS041549 · NINDS · UNIVERSITY OF COLORADO DENVER · PI BURGOON, MARK P · 2002 to 2014
$3.1M
NINDS NIH HHS NS 32623NINDS NIH HHS NS 41549NINDS NIH HHS P01 NS032623NINDS NIH HHS R01 NS041549
6 · The paper itself

Abstract

Real-time immuno-PCR (RT-IPCR) is a powerful technique that combines ELISA with the specificity and sensitivity of PCR. RT-IPCR of phage-displayed peptides exploits the unique physical associations between phenotype (the displayed peptide) and genotype (the encoding DNA) within the same phage particle. Previously, we identified phage peptides specific for recombinant antibodies (rAbs) prepared from clonally expanded plasma cells in multiple sclerosis (MS) cerebrospinal fluid (CSF) and subacute sclerosing panencephalitis (SSPE) brain. Herein, we applied phage-mediated RT-IPCR to study reactivity of these specific phage peptides for the rAbs. Compared to standard ELISA, which required greater than 10(4) or 10(5) phage particles to detect binding to rAbs, RT-IPCR detected binding with as few as 100 phage particles. RT-IPCR was also superior to ELISA in determining relative affinities of rAbs for phage peptides and was effective in screening MS CSF for IgG reactivity to phage peptides. Phage-mediated RT-IPCR is a rapid, high-throughput technology that avoids the requirement for synthetic peptides and will facilitate the identification of candidate peptides that react with the IgG in MS CSF.

Indexed as

Polymerase Chain ReactionProtein Interaction MappingAutoantibodiesBacteriophage M13Enzyme-Linked Immunosorbent AssayHumansImmunoglobulin GMultiple SclerosisPeptidesRecombinant ProteinsViral ProteinsAutoantibodiesImmunoglobulin GPeptidesRecombinant ProteinsViral Proteins

Identifiers

PMID17669417
PMCPMC2063459
OpenAlexW2026991127

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.