ArticleMarine biotechnology (New York, N.Y.)
A cDNA microarray for Crassostrea virginica and C. gigas.
Article in Marine biotechnology (New York, N.Y.). The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
18 citing papers in PubMed.
- Comparative immunogenomics of molluscs.Developmental and comparative immunology · 2017Review
- Intracellular lipid binding protein family diversity from Oyster Crassostrea gigas: genomic and structural features of invertebrate lipid transporters.Scientific reports · 2017Article
- Article
- Network analysis of oyster transcriptome revealed a cascade of cellular responses during recovery after heat shock.PloS one · 2012Article
- Development of a Pacific oyster (Crassostrea gigas) 31,918-feature microarray: identification of reference genes and tissue-enriched expression patterns.BMC genomics · 2011Article
- Introduction to a special issue in memory of Paul S. Gross.Marine biotechnology (New York, N.Y.) · 2011Article
- Design and performance of a turbot (Scophthalmus maximus) oligo-microarray based on ESTs from immune tissues.Marine biotechnology (New York, N.Y.) · 2010Article
- Microarray-based identification of gonad transcripts differentially expressed between lines of Pacific oyster selected to be resistant or susceptible to summer mortality.Marine biotechnology (New York, N.Y.) · 2010Article
- Article
- Living without Oxygen: Anoxia-Responsive Gene Expression and Regulation.Current genomics · 2009Article
- MytiBase: a knowledgebase of mussel (M. galloprovincialis) transcribed sequences.BMC genomics · 2009Article
- Generation and analysis of ESTs from the eastern oyster, Crassostrea virginica Gmelin and identification of microsatellite and SNP markers.BMC genomics · 2007Article
- Gene expression profile of hemocytes of kuruma shrimp, Marsupenaeus japonicus following peptidoglycan stimulation.Marine biotechnology (New York, N.Y.)Article
- Comparison of gene expression profiles of Fenneropenaeus chinensis challenged with WSSV and Vibrio.Marine biotechnology (New York, N.Y.)Article
- DNA microarrays for identifying fishes.Marine biotechnology (New York, N.Y.)Article
- Gene expression patterns during the larval development of European sea bass (dicentrarchus labrax) by microarray analysis.Marine biotechnology (New York, N.Y.)Article
- Transcriptome analyses of amoebic gill disease-affected Atlantic salmon (Salmo salar) tissues reveal localized host gene suppression.Marine biotechnology (New York, N.Y.)Article
- Transcriptome profiling of selectively bred Pacific oyster Crassostrea gigas families that differ in tolerance of heat shock.Marine biotechnology (New York, N.Y.)Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
22 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The eastern oyster, Crassostrea virginica, and the Pacific oyster, C. gigas, are species of global economic significance as well as important components of estuarine ecosystems and models for genetic and environmental studies. To enhance the molecular tools available for oyster research, an international group of collaborators has constructed a 27,496-feature cDNA microarray containing 4460 sequences derived from C. virginica, 2320 from C. gigas, and 16 non-oyster DNAs serving as positive and negative controls. The performance of the array was assessed by gene expression profiling using gill and digestive gland RNA derived from both C. gigas and C. virginica, and digestive gland RNA from C. ariakensis. The utility of the microarray for detection of homologous genes by cross-hybridization between species was also assessed and the correlation between hybridization intensity and sequence homology for selected genes determined. The oyster cDNA microarray is publicly available to the research community on a cost-recovery basis.
Indexed as
Identifiers
17668266What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.