Evidence map›Paper›PMID 17656582›Full record

ArticleProtein science : a publication of the Protein Society2007

Human embryonic, fetal, and adult hemoglobins have different subunit interface strengths. Correlation with lifespan in the red cell.

Lois R Manning, J Eric Russell, Julio C Padovan, Brian T Chait, Anthony Popowicz, Robert S Manning, James M Manning

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 49 citations in OpenAlex.

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  8. Review
  9. Initial Characterization of 3D Culture of Yolk Sac Tissue.Animals : an open access journal from MDPI · 2023
    Article
  10. Review
  11. Fetal and neonatal bilirubin metabolism.Frontiers in pediatrics · 2022
    Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Lois R ManningDepartment of Biology, Northeastern University, Boston, Massachusetts 02115, USA.
J Eric Russell
Julio C Padovan
Brian T Chait
Anthony Popowicz
Robert S Manning
James M Manning
Rockefeller University · USNortheastern University · USChildren's Hospital of Philadelphia · USHaverford College · US

Funding

YNG1 PHD BINDING TO H3 3METHYL AT K4 PROMOTES TRANSCRIPTION AT TARGETED ORFSP41RR000862 · NCRR · ROCKEFELLER UNIVERSITY · PI DARNELL, JAMES E · 1985 to 2011
$16.1M
STRUCTURE INTERACTION AND MECHANISM IN SICKLE HEMOGLOBINP01HL058512 · NHLBI · YESHIVA UNIVERSITY · PI JOSEPHS, ROBERT · 1997 to 2006
$12.6M
Structure-Based Antisickling Peptides that Inhibit Hb S PolymerizationU54HL070596 · NHLBI · CHILDREN'S HOSP OF PHILADELPHIA · PI OHENE-FREMPONG, KWAKU · 2003 to 2010
$9.9M
REGULATION AND FUNCTION OF A HUMAN EMBRYONIC GLOBINR01HL061399 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI RUSSELL, J ERIC · 1999 to 2012
$3.9M
CHEMICAL STUDIES OF SICKLE CELL HEMOGLOBINR01HL018819 · NHLBI · ROCKEFELLER UNIVERSITY · PI MANNING, JAMES M · 1985 to 2002
$752k
CHEMICAL STUDIES ON SICKLE CELL HEMOGLOBINR37HL018819 · NHLBI · ROCKEFELLER UNIVERSITY · PI MANNING, JAMES M · 1987 to 1996
–
NCRR NIH HHS P41 RR000862NCRR NIH HHS RR-00862NHLBI NIH HHS HL-18819NHLBI NIH HHS HL-58512NHLBI NIH HHS HL-61399NHLBI NIH HHS P01 HL058512NHLBI NIH HHS R01 HL061399NHLBI NIH HHS U54 HL070596
6 · The paper itself

Abstract

The different types of naturally occurring, normal human hemoglobins vary in their tetramer-dimer subunit interface strengths (stabilities) by three orders of magnitude in the liganded (CO or oxy) state. The presence of embryonic zeta-subunits leads to an average 20-fold weakening of tetramer-dimer interfaces compared to corresponding hemoglobins containing adult alpha-subunits. The dimer-monomer interfaces of these hemoglobins differ by at least 500-fold in their strengths; such interfaces are weak if they contain zeta-subunits and exchange with added beta-subunits in the form of beta(4) (HbH) significantly faster than do those with alpha-subunits. Subunit exchange occurs at the level of the dimer, although tetramer formation reciprocally influences the amount of dimer available for exchange. Competition between subunit types occurs so that pairs of weak embryonic hemoglobins can exchange subunits to form the stronger fetal and adult hemoglobins. The dimer strengths increase in the order Hb Portland-2 (zeta(2)beta(2)) < Hb Portland-1 (zeta(2)gamma(2)) approximately equal Hb Gower-1 (zeta(2)epsilon(2)) < Hb Gower-2 (alpha(2)epsilon(2)) < HbF(1) < HbF (alpha(2)gamma(2)) < HbA(2) (alpha(2)delta(2)), i.e., from embryonic to fetal to adult types, representing maturation from weaker to stronger monomer-monomer subunit contacts. This increasing order recapitulates the developmental order in which globins are expressed (embryonic --> fetal --> adult), suggesting that the intrinsic binding properties of the subunits themselves regarding the strengths of interfaces they form with competing subunits play an important role in the dynamics of protein assemblies and networks.

Indexed as

AnimalsDimerizationEmbryo, MammalianErythrocytesFetal HemoglobinHemoglobin A2HemoglobinsHemoglobins, AbnormalHumansHydrogen-Ion ConcentrationKineticsMiceMice, TransgenicModels, MolecularProtein ConformationProtein SubunitsFetal HemoglobinHemoglobin A2hemoglobin Gowerhemoglobin PortlandHemoglobinsHemoglobins, AbnormalProtein Subunits

Identifiers

PMID17656582
PMCPMC2203358
OpenAlexW2168488235

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.