Evidence map›Paper›PMID 17656002›Full record

ArticleBiophysical chemistry2007

Measuring rotational diffusion of MHC class I on live cells by polarized FPR.

David R Fooksman, Michael Edidin, B George Barisas

Abstract read
In one paragraph

Article in Biophysical chemistry, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Review
  2. Article
  3. Organizing MHC Class II Presentation.Frontiers in immunology · 2014
    Review
  4. Article
  5. Review
  6. Article
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

David R FooksmanDepartment of Chemistry, Colorado State University, Ft. Collins, CO 80523, USA. fooksman@saturn.med.nyu.edu
Michael Edidin
B George Barisas

Funding

CHEMISTRY AND DEVELOPMENT OF TRANSPLANTATION ANTIGENSR01AI014584 · NIAID · JOHNS HOPKINS UNIVERSITY · PI EDIDIN, MICHAEL A · 1985 to 2007
$2.8M
MECHANISMS FOR FORMATION OF CELL MEMBRANE DOMAINSR01GM058554 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI EDIDIN, MICHAEL A · 1999 to 2002
$737k
CHEMISTRY AND DEVELOPMENT OF TRANSPLANTATION ANTIGENSR37AI014584 · NIAID · JOHNS HOPKINS UNIVERSITY · PI EDIDIN, MICHAEL A · 1988 to 1997
–
NIAID NIH HHS AI-14584NIAID NIH HHS R01 AI014584NIGMS NIH HHS R01 GM058554
6 · The paper itself

Abstract

Clustering of membrane proteins is a dynamic process which can regulate cellular function and signaling. The size of receptor and other membrane protein clusters can in principle be measured in terms of their rotational diffusion. However, in practice, measuring rotation of membrane proteins of live cells has been difficult, largely because of the difficulty of rigidly attaching reporter groups to the molecules of interest. Here we show that polarized photobleaching recovery can detect rotation of membrane proteins genetically tagged with yellow fluorescent protein, YFP. MHC class I molecules were engineered with a rigid, in-sequence, YFP tag followed at the C-terminus by a pair of crosslinkable domains. When crosslinker was added we could detect changes in rotational anisotropy decay consistent with clustering of the MHC molecules. This result points the way to use of engineered fluorescent fusion proteins to measure rotational diffusion in native cell membranes.

Indexed as

AnimalsBacterial ProteinsFluorescence PolarizationFluorescence Recovery After PhotobleachingHistocompatibility Antigens Class ILuminescent ProteinsMembrane ProteinsMiceBacterial ProteinsHistocompatibility Antigens Class ILuminescent ProteinsMembrane Proteinsyellow fluorescent protein, Bacteria

Identifiers

PMID17656002
PMCPMC2094112

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.