ArticleBMC genomics2007
EasyGO: Gene Ontology-based annotation and functional enrichment analysis tool for agronomical species.
Article in BMC genomics, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 79 papers.
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Who cites it
79 citing papers in PubMed.
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- Potential evidence for transgenerational epigenetic memory in Arabidopsis thaliana following spaceflight.Communications biology · 2021Article
- Exploring the Proteomic Alterations from Untreated and Cryoablation and Irradiation Treated Giant Cell Tumors of Bone Using Liquid-Chromatography Tandem Mass Spectrometry.Molecules (Basel, Switzerland) · 2020Article
- Global quantitative analysis of the human brain proteome and phosphoproteome in Alzheimer's disease.Scientific data · 2020Article
- TMEA: A Thermodynamically Motivated Framework for Functional Characterization of Biological Responses to System Acclimation.Entropy (Basel, Switzerland) · 2020Article
- Proteomic profiling and identification of significant markers from high-grade osteosarcoma after cryotherapy and irradiation.Scientific reports · 2020Article
- Trait ontology analysis based on association mapping studies bridges the gap between crop genomics and Phenomics.BMC genomics · 2019Article
- GOTrapper: a tool to navigate through branches of gene ontology hierarchy.BMC bioinformatics · 2019Article
- Plants Grown in Parafilm-Wrapped Petri Dishes Are Stressed and Possess Altered Gene Expression Profile.Frontiers in plant science · 2019Article
- Systems analysis of phosphate-limitation-induced lipid accumulation by the oleaginous yeastBiotechnology for biofuels · 2018Article
- A New Machine Learning-Based Framework for Mapping Uncertainty Analysis in RNA-Seq Read Alignment and Gene Expression Estimation.Frontiers in genetics · 2018Article
- Identification of Linkages between EDCs in Personal Care Products and Breast Cancer through Data Integration Combined with Gene Network Analysis.International journal of environmental research and public health · 2017Article
19 more citing papers are in PubMed but not listed here.
Corrections and comments
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Authors and funding
2 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundIt is always difficult to interpret microarray results. Recently, a handful of tools have been developed to meet this need, but almost none of them were designed to support agronomical species. DESCRIPTION: This paper presents EasyGO, a web server to perform Gene Ontology based functional interpretation on groups of genes or GeneChip probe sets. EasyGO makes a special contribution to the agronomical research community by supporting Affymetrix GeneChips of both crops and farm animals and by providing stronger capabilities for results visualization and user interaction. Currently it supports 11 agronomical plants, 3 farm animals, and the model plant Arabidopsis. The authors demonstrated EasyGO's ability to uncover hidden knowledge by analyzing a group of probe sets with similar expression profiles.
conclusionEasyGO is a good tool for helping biologists and agricultural scientists to discover enriched biological knowledge that can provide solutions or suggestions for original problems. It is freely available to all users at http://bioinformatics.cau.edu.cn/easygo/.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.