Evidence map›Paper›PMID 17644628›Full record

ArticlePlant physiology2007

A study of gibberellin homeostasis and cryptochrome-mediated blue light inhibition of hypocotyl elongation.

Xiaoying Zhao, Xuhong Yu, Eloise Foo, Gregory M Symons, Javier Lopez, Krishnaprasad T Bendehakkalu, Jing Xiang, James L Weller, Xuanming Liu, James B Reid and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 64 papers.

0numbers the graph read from it
0cells of the map it votes in
64citing papers in PubMed
10.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

64 citing papers in PubMed, 172 citations in OpenAlex.

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  18. The Breeding of Winter-Hardy Malting Barley.Plants (Basel, Switzerland) · 2021
    Review
  19. Review
  20. Article

4 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 3 countries.

Xiaoying ZhaoBioenergy and Biomaterial Research Center, Hunan University, Changsha 410082, China.
Xuhong Yu
Eloise Foo
Gregory M Symons
Javier Lopez
Krishnaprasad T Bendehakkalu
Jing Xiang
James L Weller
Xuanming Liu
James B Reid
Chentao Lin
Hunan University · CNUniversity of California, Los Angeles · USUniversity of Tasmania · AU

Funding

The signaling mechanisms of Arabidopsis CRY2R01GM056265 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI LIN, CHENTAO · 2001 to 2021
$9.5M
PLANT PHOTOSENSORY RECEPTOR CRY2--SIGNALING MECHANISMR29GM056265 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI LIN, CHENTAO · 1997 to 2001
$204k
NIGMS NIH HHS GM 56265NIGMS NIH HHS R01 GM056265
6 · The paper itself

Abstract

Cryptochromes mediate blue light-dependent photomorphogenic responses, such as inhibition of hypocotyl elongation. To investigate the underlying mechanism, we analyzed a genetic suppressor, scc7-D (suppressors of cry1cry2), which suppressed the long-hypocotyl phenotype of the cry1cry2 (cryptochrome1/cryptochrome2) mutant in a light-dependent but wavelength-independent manner. scc7-D is a gain-of-expression allele of the GA2ox8 gene encoding a gibberellin (GA)-inactivating enzyme, GA 2-oxidase. Although scc7-D is hypersensitive to light, transgenic seedlings expressing GA2ox at a level higher than scc7-D showed a constitutive photomorphogenic phenotype, confirming a general role of GA2ox and GA in the suppression of hypocotyl elongation. Prompted by this result, we investigated blue light regulation of mRNA expression of the GA metabolic and catabolic genes. We demonstrated that cryptochromes are required for the blue light regulation of GA2ox1, GA20ox1, and GA3ox1 expression in transient induction, continuous illumination, and photoperiodic conditions. The kinetics of cryptochrome induction of GA2ox1 expression and cryptochrome suppression of GA20ox1 or GA3ox1 expression correlate with the cryptochrome-dependent transient reduction of GA(4) in etiolated wild-type seedlings exposed to blue light. Therefore we propose that in deetiolating seedlings, cryptochromes mediate blue light regulation of GA catabolic/metabolic genes, which affect GA levels and hypocotyl elongation. Surprisingly, no significant change in the GA(4) content was detected in the whole shoot samples of the wild-type or cry1cry2 seedlings grown in the dark or continuous blue light, suggesting that cryptochromes may also regulate GA responsiveness and/or trigger cell- or tissue-specific changes of the level of bioactive GAs.

Indexed as

ArabidopsisArabidopsis ProteinsCryptochromesFlavoproteinsGene ExpressionGibberellinsHomeostasisHypocotylLightMixed Function OxygenasesPhenotypePhotoperiodArabidopsis ProteinsAtGA2ox8 protein, ArabidopsisCRY1 protein, ArabidopsisCryptochromesFlavoproteinsgibberellin 2-dioxygenasegibberellin, 2-oxoglutarate-oxygen oxidoreductase (20-hydroxylating, oxidizing)gibberellin 3beta-hydroxylaseGibberellinsMixed Function Oxygenases

Identifiers

PMID17644628
PMCPMC1976579
OpenAlexW2100503619

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.