Evidence map›Paper›PMID 17641165›Full record

ArticleScience (New York, N.Y.)2007

A whole-genome association study of major determinants for host control of HIV-1.

Jacques Fellay, Kevin V Shianna, Dongliang Ge, Sara Colombo, Bruno Ledergerber, Mike Weale, Kunlin Zhang, Curtis Gumbs, Antonella Castagna, Andrea Cossarizza and 17 more

Abstract readMulticenter Study
In one paragraph

Article in Science (New York, N.Y.), 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 733 papers, 5 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
733citing papers in PubMed, 5 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

733 citing papers in PubMed, 5 syntheses or guidelines pooled it.

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  17. The HIV reservoir landscape in elite controllers.Current opinion in HIV and AIDS · 2026
    Review
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  20. Article

673 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

27 authors.

Jacques FellayCenter for Population Genomics and Pharmacogenetics, Duke Institute for Genome Sciences and Policy, Duke University, Durham, NC 27710, USA.
Kevin V Shianna
Dongliang Ge
Sara Colombo
Bruno Ledergerber
Mike Weale
Kunlin Zhang
Curtis Gumbs
Antonella Castagna
Andrea Cossarizza
Alessandro Cozzi-Lepri
Andrea De Luca
Philippa Easterbrook
Patrick Francioli
Simon Mallal
Javier Martinez-Picado
José M Miro
Niels Obel
Jason P Smith
Josiane Wyniger
Patrick Descombes
Stylianos E Antonarakis
Norman L Letvin
Andrew J McMichael
Barton F Haynes
Amalio Telenti
David B Goldstein

Funding

Viral Sequencing CoreU19AI067854 · NIAID · DUKE UNIVERSITY · PI GRAY, CLIVE MAURICE · 2006 to 2011
$290.5M
Medical Research Council G0200585Medical Research Council MC_U137884177NIAID NIH HHS U19 AI067854
6 · The paper itself

Abstract

Understanding why some people establish and maintain effective control of HIV-1 and others do not is a priority in the effort to develop new treatments for HIV/AIDS. Using a whole-genome association strategy, we identified polymorphisms that explain nearly 15% of the variation among individuals in viral load during the asymptomatic set-point period of infection. One of these is found within an endogenous retroviral element and is associated with major histocompatibility allele human leukocyte antigen (HLA)-B*5701, whereas a second is located near the HLA-C gene. An additional analysis of the time to HIV disease progression implicated two genes, one of which encodes an RNA polymerase I subunit. These findings emphasize the importance of studying human genetic variation as a guide to combating infectious agents.

Indexed as

Genome, HumanCohort StudiesDisease ProgressionDNA-Binding ProteinsFemaleGenes, MHC Class IHaplotypesHIV-1HIV InfectionsHLA-B AntigensHLA-C AntigensHumansImmediate-Early ProteinsMajor Histocompatibility ComplexMalePolymorphism, Single NucleotideDNA-Binding ProteinsHCP5 long noncoding RNA, humanHLA-B*57:01 antigenHLA-B AntigensHLA-C AntigensImmediate-Early ProteinsPOLR1H protein, humanRNA, Long NoncodingRNA, UntranslatedRNF39 protein, human

Identifiers

PMID17641165
PMCPMC1991296

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.