Evidence map›Paper›PMID 17640573›Full record

ArticleFree radical biology & medicine2007

Gene expression of rat alveolar type II cells during hyperoxia exposure and early recovery.

Zhongming Chen, Narendranath Reddy Chintagari, Yujie Guo, Manoj Bhaskaran, Jiwang Chen, Li Gao, Nili Jin, Tingting Weng, Lin Liu

Open access · greenAbstract read
In one paragraph

Article in Free radical biology & medicine, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.7field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Protein expression profile of rat type two alveolar epithelial cells during hyperoxic stress and recovery.American journal of physiology. Lung cellular and molecular physiology · 2013
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  11. Lung alveolar integrity is compromised by telomere shortening in telomerase-null mice.American journal of physiology. Lung cellular and molecular physiology · 2009
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Zhongming ChenDepartment of Physiological Sciences, Oklahoma State University, 264 McElroy Hall, Stillwater, OK 74078, USA.
Narendranath Reddy Chintagari
Yujie Guo
Manoj Bhaskaran
Jiwang Chen
Li Gao
Nili Jin
Tingting Weng
Lin Liu
Oklahoma State University · US

Funding

MOLECULAR MECHANISMS OF LUNG SURFACTANT SECRETIONR01HL052146 · NHLBI · OKLAHOMA STATE UNIVERSITY STILLWATER · PI LIU, LIN · 2000 to 2007
$2.3M
Mechanisms of Alveolar Fluid TransportR01HL083188 · NHLBI · OKLAHOMA STATE UNIVERSITY STILLWATER · PI LIU, LIN · 2006 to 2009
$1.4M
Mechanisms of Alveolar Epithelial Cell DifferentiationR01HL071628 · NHLBI · OKLAHOMA STATE UNIVERSITY STILLWATER · PI LIU, LIN · 2003 to 2006
$1.2M
ANNEXINS AND LUNG SURFACTANT SECRETIONR29HL052146 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI LIU, LIN · 1995 to 1999
–
NHLBI NIH HHS HL-071628NHLBI NIH HHS HL-083188NHLBI NIH HHS HL-52146NHLBI NIH HHS R01 HL052146NHLBI NIH HHS R01 HL071628NHLBI NIH HHS R01 HL083188NHLBI NIH HHS R29 HL052146
6 · The paper itself

Abstract

Alveolar epithelial cell (AEC) injury and repair during hyperoxia exposure and recovery have been investigated for decades, but the molecular mechanisms of these processes are not clear. To identify potentially important genes involved in lung injury and repair, we studied the gene expression profiles of isolated AEC II from control, 48-h hyperoxia-exposed (>95% O(2)), and 1-7 day recovering rats using a DNA microarray containing 10,000 genes. Fifty genes showed significant differential expression between two or more time points (P<0.05, fold change >2). These genes can be classified into 8 unique gene expression patterns. Real-time PCR verified 14 selected genes in three patterns related to hyperoxia exposure and early recovery. The change in the protein level for two of the selected genes, bmp-4 and retnla, paralleled that of the mRNA level. Many of these genes were found to be involved in cell proliferation and differentiation. In an in vitro AEC trans-differentiation culture model using AEC II isolated from control and 48-h hyperoxia-exposed rats, the expressions of the cell proliferation and differentiation genes identified above were consistent with their predicted roles in the trans-differentiation of AEC. These data indicate that a coordinated mechanism may control AEC differentiation during in vivo hyperoxia exposure and recovery as well as during in vitro AEC culture.

Indexed as

AnimalsBlotting, WesternCell DifferentiationCell ProliferationEpithelial CellsGene ExpressionGene Expression ProfilingHyperoxiaImmunohistochemistryMaleOligonucleotide Array Sequence AnalysisPulmonary AlveoliRatsRats, Sprague-DawleyReverse Transcriptase Polymerase Chain Reaction

Identifiers

PMID17640573
PMCPMC2075096
OpenAlexW2036394159

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.