Evidence map›Paper›PMID 17634307›Full record

ArticleJournal of clinical microbiology2007

Multiplex, bead-based suspension array for molecular determination of common Salmonella serogroups.

Collette Fitzgerald, Marcus Collins, Susan van Duyne, Matthew Mikoleit, Teresa Brown, Patricia Fields

Abstract read
In one paragraph

Article in Journal of clinical microbiology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 64 papers.

0numbers the graph read from it
0cells of the map it votes in
64citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

64 citing papers in PubMed.

  1. Article
  2. Applied and environmental microbiology · 2025
    Article
  3. Review
  4. Review
  5. Article
  6. bettercallsal: better calling ofFrontiers in microbiology · 2023
    Article
  7. Article
  8. Changes in the genomes and methylomes of threeFrontiers in microbiology · 2022
    Article
  9. Article
  10. Article
  11. Comparison of xMAPFrontiers in cellular and infection microbiology · 2020
    Article
  12. SeqSero2: Rapid and ImprovedApplied and environmental microbiology · 2019
    Article
  13. Frontiers in microbiology · 2019
    Article
  14. Diversity and Dynamics ofFrontiers in microbiology · 2019
    Article
  15. CharacterizingFrontiers in veterinary science · 2019
    Article
  16. Frontiers in microbiology · 2018
    Article
  17. Article
  18. Review
  19. Article
  20. Article

4 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Collette FitzgeraldEnteric Diseases Laboratory Preparedness Branch, Division of Foodborne, Bacterial and Mycotic Diseases, National Center for Zoonotic, Vector-Borne and Enteric Diseases, Centers for Disease Control and Prevention, Atlanta, GA 30333, USA. chf3@cdc.gov
Marcus Collins
Susan van Duyne
Matthew Mikoleit
Teresa Brown
Patricia Fields

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We report the development and evaluation of a Salmonella O-group-specific Bio-Plex assay to detect the six most common serogroups in the United States (B, C(1), C(2), D, E, and O13) plus serotype Paratyphi A. The assay is based on rfb gene targets directly involved in O-antigen biosynthesis; it can be completed 45 min post-PCR amplification. The assay correctly and specifically identified 362 of 384 (94.3%) isolates tested in comparison to traditional serotyping. Seventeen isolates (4.4%) produced results consistent with what is known about the molecular basis for serotypes but different from the results of traditional serotyping, and five isolates (1.3%) generated false-negative results. Molecular determination of the serogroup for rough isolates was consistent with a common serotype in most instances, indicating that this approach has the potential to provide O-group information for isolates that do not express an O antigen. We also report the sequence of the O-antigen-encoding rfb gene cluster from Salmonella enterica serotype Poona (serogroup O13). Compared with other, previously characterized rfb regions, the O13 rfb gene cluster was most closely related to Escherichia coli O127 and O86. The O-group Bio-Plex assay described here provides an easy-to-use, high-throughput system for rapid detection of common Salmonella serogroups.

Indexed as

Antigens, BacterialBacterial ProteinsBacterial Typing TechniquesDNA PrimersHumansMultigene FamilyO AntigensPolymerase Chain ReactionSalmonellaSerotypingAntigens, BacterialBacterial ProteinsDNA PrimersH antigenO Antigensrfb protein, Bacteria

Identifiers

PMID17634307
PMCPMC2045348

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.