Evidence map›Paper›PMID 17634240›Full record

ArticleJournal of virology2007

Alanine scanning of the hepatitis C virus core protein reveals numerous residues essential for production of infectious virus.

Catherine L Murray, Christopher T Jones, Jodie Tassello, Charles M Rice

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 72 papers.

0numbers the graph read from it
0cells of the map it votes in
72citing papers in PubMed
6.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

72 citing papers in PubMed, 111 citations in OpenAlex.

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12 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Catherine L MurrayLaboratory of Virology and Infectious Disease, Center for the Study of Hepatitis C, The Rockefeller University, 1230 York Ave., New York, NY 10021, USA.
Christopher T Jones
Jodie Tassello
Charles M Rice
Rockefeller University · US

Funding

Characterization of the HCV p7 ProteinF32DK081193 · NIDDK · ROCKEFELLER UNIVERSITY · PI JONES, CHRISTOPHER T · 2007 to 2009
$159k
NIDDK NIH HHS DK081193NIDDK NIH HHS F32 DK081193
6 · The paper itself

Abstract

Hepatitis C virus (HCV) is an important human pathogen affecting an estimated 3% of the world's population. Recent advances have enabled in vitro propagation of the virus and allow assembly and egress to be investigated for the first time. As a component of the virion, the HCV core protein likely functions primarily in infectious virus production, although little is known about the determinants of this activity. To investigate the roles of core in the viral life cycle, we performed a comprehensive deletion and alanine scanning mutagenesis study of this protein in the context of a genotype 2a reporter virus. We have confirmed that core protein is essential for infectious virion production and have identified numerous residues required for this role. The infectivity of several assembly-defective core mutants could be rescued by compensatory mutations identified in p7 and NS2, suggesting genetic interactions with core and highlighting the importance of these nonstructural proteins in infectious virion morphogenesis.

Indexed as

AlanineAmino Acid SequenceAmino Acid SubstitutionCell LineGenome, ViralHepacivirusHumansMolecular Sequence DataMutagenesis, Site-DirectedMutationSerineViral Core ProteinsVirionVirus ReplicationAlaninenucleocapsid protein, Hepatitis C virusSerineViral Core Proteins

Identifiers

PMID17634240
PMCPMC2045476
OpenAlexW2113416147

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.