Evidence map›Paper›PMID 17631630›Full record

ArticleJournal of bacteriology2007

VirB1* promotes T-pilus formation in the vir-Type IV secretion system of Agrobacterium tumefaciens.

John Zupan, Cheryl A Hackworth, Julieta Aguilar, Doyle Ward, Patricia Zambryski

Abstract read
In one paragraph

Article in Journal of bacteriology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Beyond survival to domination:Frontiers in microbiology · 2025
    Review
  5. Article
  6. Article
  7. Peptidoglycan deacetylation controls type IV secretion and the intracellular survival of the bacterial pathogenProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  8. Comparative Genomic Analysis ofFrontiers in microbiology · 2022
    Article
  9. The VirB System Plays a Crucial Role inInternational journal of molecular sciences · 2021
    Review
  10. Comparative genome analysis ofMicrobial genomics · 2019
    Article
  11. Article
  12. Interplay between Peptidoglycan Biology and Virulence in Gram-Negative Pathogens.Microbiology and molecular biology reviews : MMBR · 2018
    Review
  13. Lytic transglycosylases: concinnity in concision of the bacterial cell wall.Critical reviews in biochemistry and molecular biology · 2017
    Review
  14. Article
  15. Article
  16. Review
  17. PopZ identifies the new pole, and PodJ identifies the old pole during polar growth in Agrobacterium tumefaciens.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

John ZupanDepartment of Plant and Microbial Biology, Koshland Hall, University of California, Berkeley, CA 94720-3102, USA.
Cheryl A Hackworth
Julieta Aguilar
Doyle Ward
Patricia Zambryski

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The vir-type IV secretion system of Agrobacterium is assembled from 12 proteins encoded by the virB operon and virD4. VirB1 is one of the least-studied proteins encoded by the virB operon. Its N terminus is a lytic transglycosylase. The C-terminal third of the protein, VirB1*, is cleaved from VirB1 and secreted to the outside of the bacterial cell, suggesting an additional function. We show that both nopaline and octopine strains produce abundant amounts of VirB1* and perform detailed studies on nopaline VirB1*. Both domains are required for wild-type virulence. We show here that the nopaline type VirB1* is essential for the formation of the T pilus, a subassembly of the vir-T4SS composed of processed and cyclized VirB2 (major subunit) and VirB5 (minor subunit). A nopaline virB1 deletion strain does not produce T pili. Complementation with full-length VirB1 or C-terminal VirB1*, but not the N-terminal lytic transglycosylase domain, restores T pili containing VirB2 and VirB5. T-pilus preparations also contain extracellular VirB1*. Protein-protein interactions between VirB1* and VirB2 and VirB5 were detected in the yeast two-hybrid assay. We propose that VirB1 is a bifunctional protein required for virT4SS assembly. The N-terminal lytic transglycosylase domain provides localized lysis of the peptidoglycan cell wall to allow insertion of the T4SS. The C-terminal VirB1* promotes T-pilus assembly through protein-protein interactions with T-pilus subunits.

Indexed as

Agrobacterium tumefaciensAmino Acid SequenceArginineBacterial ProteinsFimbriae, BacterialGene Expression Regulation, BacterialKalanchoeMolecular Sequence DataPeptidoglycan GlycosyltransferasePlant LeavesPlant TumorsTwo-Hybrid System TechniquesVirulenceVirulence FactorsArginineBacterial ProteinsnopalineoctopinePeptidoglycan GlycosyltransferaseVirulence Factors

Identifiers

PMID17631630
PMCPMC2045169

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.