Evidence map›Paper›PMID 17630698›Full record

ArticleBiochemistry2007

Two conformational changes are associated with glutamate translocation by the glutamate transporter EAAC1.

Carsten Mim, Zhen Tao, Christof Grewer

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.4field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. SLC1 glutamate transporters.Pflugers Archiv : European journal of physiology · 2014
    Review
  6. Article
  7. Induced fit substrate binding to an archeal glutamate transporter homologue.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Hetero-oligomerization of neuronal glutamate transporters.The Journal of biological chemistry · 2011
    Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Inward-facing conformation of glutamate transporters as revealed by their inverted-topology structural repeats.Proceedings of the National Academy of Sciences of the United States of America · 2009
    Article
  18. Molecular simulations elucidate the substrate translocation pathway in a glutamate transporter.Proceedings of the National Academy of Sciences of the United States of America · 2009
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Carsten MimDepartment of Physiology, University of Miami School of Medicine, 1600 NW 10th Avenue, Miami, Florida 33136, USA.
Zhen Tao
Christof Grewer
University of Miami · USMax Planck Institute of Biophysics · DE

Funding

Molecular Basis of Glutamate TransportR01NS049335 · NINDS · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI GREWER, CHRISTOF THEODOR · 2004 to 2012
$2.0M
NINDS NIH HHS R01 NS049335NINDS NIH HHS R01-NS049335-02
6 · The paper itself

Abstract

Glutamate is transported across membranes by means of a carrier mechanism that is thought to require conformational changes of the transport protein. In this work, we have determined the thermodynamic parameters of glutamate and the Na+ binding steps to their extracellular binding sites along with the activation parameters of rapid, glutamate-induced processes in the transport cycle by analyzing the temperature dependence of glutamate transport at steady state and pre-steady state. Our results suggest that glutamate binding to the transporter is driven by a negative reaction enthalpy (DeltaH0 = -33 kJ/mol), whereas the tighter binding of the non-transportable inhibitor TBOA is caused by an additional increase in entropy. Processes linked to the binding of glutamate and Na+ to the transporter are associated with low activation barriers, indicative of diffusion-controlled reactions. The activation enthalpies of two processes in the glutamate translocation branch of the transport cycle were DeltaH++ = 95 kJ/mol and DeltaH++ = 120 kJ/mol, respectively. Such large values of DeltaH++ suggest that these processes are rate-limited by conformational changes of the transporter. We also found a large activation barrier for steady-state glutamate transport, which is rate-limited by the K+-dependent relocation of the empty transporter. Together, these results suggest that two conformational changes accompany glutamate translocation and at least one conformational change accompanies the relocation of the empty transporter. We interpret the data with an alternating access model that includes the closing and opening of an extracellular and an intracellular gate, respectively, in analogy to a hypothetical model proposed previously on the basis of the crystal structure of the bacterial glutamate transporter GltPh.

Indexed as

Protein ConformationAlgorithmsAspartic AcidBiological TransportCell LineExcitatory Amino Acid Transporter 3Excitatory Amino Acid Transporter 4GlutamatesGlutamic AcidHumansIndolesKineticsMembrane PotentialsModels, MolecularPatch-Clamp TechniquesProtein Binding4-methoxy-7-nitroindolinyl-glutamateAspartic AcidbenzyloxyaspartateExcitatory Amino Acid Transporter 3Excitatory Amino Acid Transporter 4GlutamatesGlutamic AcidIndolesSLC1A1 protein, humanSLC1A6 protein, humanSodium

Identifiers

PMID17630698
PMCPMC2430070
OpenAlexW2039553498

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.