Evidence map›Paper›PMID 17630287›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2007

Recognition of polyadenosine RNA by zinc finger proteins.

Seth M Kelly, Suzette A Pabit, Chad M Kitchen, Peng Guo, Kavita A Marfatia, T J Murphy, Anita H Corbett, Keith M Berland

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 92 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Seth M KellyDepartment of Biochemistry and Pharmacology, Emory University School of Medicine, Atlanta, GA 30322, USA.
Suzette A Pabit
Chad M Kitchen
Peng Guo
Kavita A Marfatia
T J Murphy
Anita H Corbett
Keith M Berland
Emory University · US

Funding

MOLECULAR BASIS OF RAN MEDIATED NUCLEAR TRANSPORTR01GM058728 · NIGMS · EMORY UNIVERSITY · PI CORBETT, ANITA H. · 1999 to 2016
$5.4M
NIGMS NIH HHS R01 GM058728
6 · The paper itself

Abstract

Messenger RNA transcripts are coated from cap to tail with a dynamic combination of RNA binding proteins that process, package, and ultimately regulate the fate of mature transcripts. One class of RNA binding proteins essential for multiple aspects of mRNA metabolism consists of the poly(A) binding proteins. Previous studies have concentrated on the canonical RNA recognition motif-containing poly(A) binding proteins as the sole family of poly(A)-specific RNA binding proteins. In this study, we present evidence for a previously uncharacterized poly(A) recognition motif consisting of tandem CCCH zinc fingers. We have probed the nucleic acid binding properties of a yeast protein, Nab2, that contains this zinc finger motif. Results of this study reveal that the seven tandem CCCH zinc fingers of Nab2 specifically bind to polyadenosine RNA with high affinity. Furthermore, we demonstrate that a human protein, ZC3H14, which contains CCCH zinc fingers homologous to those found in Nab2, also specifically binds polyadenosine RNA. Thus, we propose that these proteins are members of an evolutionarily conserved family of poly(A) RNA binding proteins that recognize poly(A) RNA through a fundamentally different mechanism than previously characterized RNA recognition motif-containing poly(A) binding proteins.

Indexed as

AdenosineAmino Acid SequenceConserved SequenceHumansMolecular Sequence DataNuclear ProteinsNucleocytoplasmic Transport ProteinsPoly(A)-Binding ProteinsPolymersProtein BindingRNARNA-Binding ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsZinc FingersAdenosineNAB2 protein, S cerevisiaeNuclear ProteinsNucleocytoplasmic Transport ProteinsPoly(A)-Binding ProteinspolyadenosinePolymersRNARNA-Binding ProteinsSaccharomyces cerevisiae ProteinsZC3H14 protein, human

Identifiers

PMID17630287
PMCPMC1941466
OpenAlexW2088525343

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.