Evidence map›Paper›PMID 17627281›Full record

ArticleThe EMBO journal2007

Two-pronged survival strategy for the major cystic fibrosis pathogen, Pseudomonas aeruginosa, lacking the capacity to degrade nitric oxide during anaerobic respiration.

Sang Sun Yoon, Ahmet C Karabulut, John D Lipscomb, Robert F Hennigan, Sergei V Lymar, Stephanie L Groce, Andrew B Herr, Michael L Howell, Patricia J Kiley, Michael J Schurr and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 70 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 7 institutions in 1 country.

Sang Sun YoonDepartment of Molecular Genetics, Biochemistry and Microbiology, University of Cincinnati College of Medicine, Cincinnati, OH 45267-0524, USA.
Ahmet C Karabulut
John D Lipscomb
Robert F Hennigan
Sergei V Lymar
Stephanie L Groce
Andrew B Herr
Michael L Howell
Patricia J Kiley
Michael J Schurr
Benjamin Gaston
Kyoung-Hee Choi
Herbert P Schweizer
Daniel J Hassett
University of Cincinnati Medical Center · USColorado State University · USUniversity of Minnesota · USBrookhaven National Laboratory · USTulane University · USUniversity of Virginia · USUniversity of Wisconsin–Madison · US

Funding

OXYGENASE ENZYME MECHANISMR01GM024689 · NIGMS · UNIVERSITY OF MINNESOTA TWIN CITIES · PI LIPSCOMB, JOHN D · 1985 to 2016
$3.8M
Regulation of Ps. aeruginosa Virulence Factors by AlgRR01AI050812 · NIAID · UNIVERSITY OF COLORADO DENVER · PI SCHURR, MICHAEL JOHN · 2004 to 2008
$1.3M
OXYGENASE ENZYME MECHANISMR37GM024689 · NIGMS · UNIVERSITY OF MINNESOTA TWIN CITIES · PI LIPSCOMB, JOHN D · 1994 to 2003
$1.1M
B.pseudomallei bioterrorism and quorum sensingR03AI053079 · NIAID · UNIVERSITY OF CINCINNATI · PI HASSETT, DANIEL J. · 2002 to 2003
$154k
NIAID NIH HHS AI-53079NIAID NIH HHS R01 AI050812NIAID NIH HHS R03 AI053079NIGMS NIH HHS GM-24689NIGMS NIH HHS R01 GM024689NIGMS NIH HHS R37 GM024689
6 · The paper itself

Abstract

Protection from NO gas, a toxic byproduct of anaerobic respiration in Pseudomonas aeruginosa, is mediated by nitric oxide (NO) reductase (NOR), the norCB gene product. Nevertheless, a norCB mutant that accumulated approximately 13.6 microM NO paradoxically survived anaerobic growth. Transcription of genes encoding nitrate and nitrite reductases, the enzymes responsible for NO production, was reduced >50- and 2.5-fold in the norCB mutant. This was due, in part, to a predicted compromise of the [4Fe-4S](2+) cluster in the anaerobic regulator ANR by physiological NO levels, resulting in an inability to bind to its cognate promoter DNA sequences. Remarkably, two O(2)-dependent dioxygenases, homogentisate-1,2-dioxygenase (HmgA) and 4-hydroxyphenylpyruvate dioxygenase (Hpd), were derepressed in the norCB mutant. Electron paramagnetic resonance studies showed that HmgA and Hpd bound NO avidly, and helped protect the norCB mutant in anaerobic biofilms. These data suggest that protection of a P. aeruginosa norCB mutant against anaerobic NO toxicity occurs by both control of NO supply and reassignment of metabolic enzymes to the task of NO sequestration.

Indexed as

AnaerobiosisBacterial ProteinsCystic FibrosisElectrophoresis, Gel, Two-DimensionalMutationNitric OxidePseudomonas aeruginosaSpectrum AnalysisTranscription, GeneticBacterial ProteinsNitric Oxide

Identifiers

PMID17627281
PMCPMC1949006
OpenAlexW2139426378

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.