Evidence map›Paper›PMID 17626058›Full record

ArticleDevelopment (Cambridge, England)2007

Regulation of the Arabidopsis root vascular initial population by LONESOME HIGHWAY.

Kyoko Ohashi-Ito, Dominique C Bergmann

Abstract read
In one paragraph

Article in Development (Cambridge, England), 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 79 papers.

0numbers the graph read from it
0cells of the map it votes in
79citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

79 citing papers in PubMed.

  1. Article
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  4. Review
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  11. Article
  12. Spatial regulation of plant hormone action.Journal of experimental botany · 2023
    Review
  13. Evolution and diversification of the ACT-like domain associated with plant basic helix-loop-helix transcription factors.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  14. Article
  15. Article
  16. Article
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  18. Article
  19. Article
  20. Article

19 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Kyoko Ohashi-ItoStanford University, Department of Biological Sciences, Stanford, CA 94305, USA.
Dominique C Bergmann

Funding

Epidermal specification mutants of ArabidopsisF32GM064273 · NIGMS · CARNEGIE INSTITUTION OF WASHINGTON, D.C. · PI BERGMANN, DOMINIQUE C · 2001 to 2004
$130k
NIGMS NIH HHS 5F32GM064273-03NIGMS NIH HHS F32 GM064273
6 · The paper itself

Abstract

Complex organisms consist of a multitude of cell types arranged in a precise spatial relation to each other. Arabidopsis roots generally exhibit radial tissue organization; however, within a tissue layer, cells are not identical. Specific vascular cell types are arranged in diametrically opposed longitudinal files that maximize the distance between them and create a bilaterally symmetric (diarch) root. Mutations in the LONESOME HIGHWAY (LHW) gene eliminate bilateral symmetry and reduce the number of cells in the center of the root, resulting in roots with only single xylem and phloem poles. LHW does not appear to be required for the creation of any specific cell type, but coordinately controls the number of all vascular cell types by regulating the size of the pool of cells from which they arise. We cloned LHW and found that it encodes a protein with weak sequence similarity to basic helix-loop-helix (bHLH)-domain proteins. LHW is a transcriptional activator in vitro. In plants, LHW is nuclear-localized and is expressed in the root meristems, where we hypothesize it acts independently of other known root-patterning genes to promote the production of stele cells, but might also indirectly feed into established regulatory networks for the maintenance of the root meristem.

Indexed as

Amino Acid SequenceArabidopsisArabidopsis ProteinsCloning, MolecularDimerizationGene Expression Regulation, PlantIndoleacetic AcidsModels, BiologicalMolecular Sequence DataPhenotypePhloemPlant ProteinsPlant RootsPlants, Genetically ModifiedProtein KinasesReceptors, Cell SurfaceArabidopsis ProteinsIndoleacetic AcidsLHW protein, ArabidopsisPlant ProteinsProtein KinasesReceptors, Cell SurfaceTrans-ActivatorsWOL protein, Arabidopsis

Identifiers

PMID17626058
PMCPMC3145339

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.