Evidence map›Paper›PMID 17622196›Full record

ArticlePLoS biology2007

Myc dynamically and preferentially relocates to a transcription factory occupied by Igh.

Cameron S Osborne, Lyubomira Chakalova, Jennifer A Mitchell, Alice Horton, Andrew L Wood, Daniel J Bolland, Anne E Corcoran, Peter Fraser

Open access · goldAbstract read
In one paragraph

Article in PLoS biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 194 papers.

0numbers the graph read from it
0cells of the map it votes in
194citing papers in PubMed
18.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

194 citing papers in PubMed, 391 citations in OpenAlex.

  1. A misplaced lncRNA causes brachydactyly in humans.The Journal of clinical investigation · 2012
    Trial
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  20. Chromatin Hubs: A biological and computational outlook.Computational and structural biotechnology journal · 2022
    Review

134 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Cameron S OsborneLaboratory of Chromatin and Gene Expression, The Babraham Institute, Cambridge, United Kingdom. cameron.osborne@bbsrc.ac.uk
Lyubomira Chakalova
Jennifer A Mitchell
Alice Horton
Andrew L Wood
Daniel J Bolland
Anne E Corcoran
Peter Fraser
Babraham Institute · GB

Funding

Biotechnology and Biological Sciences Research Council BBS/E/B/0000C222Medical Research Council G117/530
6 · The paper itself

Abstract

Transcription in mammalian nuclei is highly compartmentalized in RNA polymerase II-enriched nuclear foci known as transcription factories. Genes in cis and trans can share the same factory, suggesting that genes migrate to preassembled transcription sites. We used fluorescent in situ hybridization to investigate the dynamics of gene association with transcription factories during immediate early (IE) gene induction in mouse B lymphocytes. Here, we show that induction involves rapid gene relocation to transcription factories. Importantly, we find that the Myc proto-oncogene on Chromosome 15 is preferentially recruited to the same transcription factory as the highly transcribed Igh gene located on Chromosome 12. Myc and Igh are the most frequent translocation partners in plasmacytoma and Burkitt lymphoma. Our results show that transcriptional activation of IE genes involves rapid relocation to preassembled transcription factories. Furthermore, the data imply a direct link between the nonrandom interchromosomal organization of transcribed genes at transcription factories and the incidence of specific chromosomal translocations.

Indexed as

Gene Expression RegulationGenes, Immediate-EarlyGenes, Immunoglobulin Heavy ChainImmunoglobulin Heavy ChainsTranscription, GeneticAllelesAnimalsB-LymphocytesCell NucleusIn Situ Hybridization, FluorescenceMiceMice, Inbred BALB CNeoplasmsProto-Oncogene Proteins c-mycRNA Polymerase IITranscriptional ActivationImmunoglobulin Heavy ChainsProto-Oncogene Proteins c-mycRNA Polymerase II

Identifiers

PMID17622196
PMCPMC1945077
OpenAlexW2077154575

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.