Evidence map›Paper›PMID 17620417›Full record

ArticleMolecular and cellular biology2007

Analysis of turnover and translation regulatory RNA-binding protein expression through binding to cognate mRNAs.

Rudolf Pullmann, Hyeon Ho Kim, Kotb Abdelmohsen, Ashish Lal, Jennifer L Martindale, Xiaoling Yang, Myriam Gorospe

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 133 papers.

0numbers the graph read from it
0cells of the map it votes in
133citing papers in PubMed
6.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

133 citing papers in PubMed, 203 citations in OpenAlex.

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  14. Pin1 and Alzheimer's disease.Translational research : the journal of laboratory and clinical medicine · 2023
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  15. Cup is essential forRNA biology · 2023
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  18. The landscape of aging.Science China. Life sciences · 2022
    Review
  19. Review
  20. T-Cell Intracellular Antigen 1-Like Protein in Physiology and Pathology.International journal of molecular sciences · 2022
    Review

73 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Rudolf PullmannLaboratory of Cellular and Molecular Biology, National Institute on Aging-Intramural Research Program, National Institutes of Health, Baltimore, Maryland 21228, USA.
Hyeon Ho Kim
Kotb Abdelmohsen
Ashish Lal
Jennifer L Martindale
Xiaoling Yang
Myriam Gorospe
National Institutes of Health · USInstitute on Aging · US

Funding

Post-transcriptional Regulation Of Proliferative and Stress Response GenesZIAAG000511 · NIA · NATIONAL INSTITUTE ON AGING · PI GOROSPE, MYRIAM · 2009 to 2025
$25.4M
Post-transcriptional Regulation Of Proliferative and Stress Response GenesZ01AG000511 · NIA · NATIONAL INSTITUTE ON AGING · PI GOROSPE, MYRIAM NONE · 1998 to 2008
$1.6M
RNA-Binding Proteins that Modulate Proliferative and Stress-Response GenesZIAAG000392 · NIA · NATIONAL INSTITUTE ON AGING · PI GOROSPE, MYRIAM · 2009 to 2010
$1.1M
RNA-Binding Proteins that Modulate Proliferative and Stress-Response GenesZ01AG000392 · NIA · NATIONAL INSTITUTE ON AGING · PI GOROSPE, MYRIAM NONE · 2008 to 2008
$592k
Intramural NIH HHS
6 · The paper itself

Abstract

RNA-binding proteins (RBPs) that associate with specific mRNA sequences and function as mRNA turnover and translation regulatory (TTR) RBPs are emerging as pivotal posttranscriptional regulators of gene expression. However, little is known about the mechanisms that govern the expression of TTR-RBPs. Here, we employed human cervical carcinoma HeLa cells to test the hypothesis that TTR-RBP expression is influenced posttranscriptionally by TTR-RBPs themselves. Systematic testing of the TTR-RBPs AUF1, HuR, KSRP, NF90, TIA-1, and TIAR led to three key discoveries. First, each TTR-RBP was found to associate with its cognate mRNA and with several other TTR-RBP-encoding mRNAs, as determined by testing both endogenous and biotinylated transcripts. Second, silencing of individual TTR-RBPs influenced the expression of other TTR-RBPs at the mRNA and/or protein level. Third, further analysis of two specific ribonucleoprotein (RNP) complexes revealed that TIA-1 expression was controlled via HuR-enhanced mRNA stabilization and TIAR-repressed translation. Together, our findings underscore the notion that TTR-RBP expression is controlled, at least in part, at the posttranscriptional level through a complex circuitry of self- and cross-regulatory RNP interactions.

Indexed as

Gene Expression RegulationProtein Biosynthesis3' Untranslated RegionsBiotinylationBlotting, WesternGenes, ReporterGreen Fluorescent ProteinsHeLa CellsHumansPoly(A)-Binding ProteinsPrecipitin TestsProtein Processing, Post-TranslationalRNA-Binding ProteinsRNA InterferenceRNA, MessengerRNA, Small Interfering3' Untranslated RegionsGreen Fluorescent ProteinsPoly(A)-Binding ProteinsRNA-Binding ProteinsRNA, MessengerRNA, Small InterferingT-Cell Intracellular Antigen-1TIA1 protein, human

Identifiers

PMID17620417
PMCPMC2099612
OpenAlexW2073427046

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.