ArticleExtremophiles : life under extreme conditions2007
Proteomic studies of an Antarctic cold-adapted bacterium, Shewanella livingstonensis Ac10, for global identification of cold-inducible proteins.
Article in Extremophiles : life under extreme conditions, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.
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Who cites it
21 citing papers in PubMed.
- Article
- Article
- Transcriptomic Analysis Reveals that Changes in Gene Expression Contribute to Microbacterium sediminis YLB-01 Adaptation at Low Temperature Under High Hydrostatic Pressure.Current microbiology · 2022Article
- Morphological Features and Cold-Response Gene Expression in MesophilicMicroorganisms · 2021Article
- Psychrophiles: A journey of hope.Journal of biosciences · 2021Review
- Adaptation of the Marine BacteriumInternational journal of molecular sciences · 2020Article
- Structural and functional insights into TRiC chaperonin from a psychrophilic yeast, Glaciozyma antarctica.Cell stress & chaperones · 2019Article
- Development of a cooperative two-factor adaptive-evolution method to enhance lipid production and prevent lipid peroxidation inBiotechnology for biofuels · 2018Article
- Comparative Transcriptomics of Cold Growth and Adaptive Features of a Eury- and Steno-Psychrophile.Frontiers in microbiology · 2018Article
- New Insights into the Functions of Transcription Factors that Bind the RNA Polymerase Secondary Channel.Biomolecules · 2015Review
- Alkyl hydroperoxide reductase enhances the growth of Leuconostoc mesenteroides lactic acid bacteria at low temperatures.AMB Express · 2015Article
- Some like it cold: understanding the survival strategies of psychrophiles.EMBO reports · 2014Review
- Construction of a simple biocatalyst using psychrophilic bacterial cells and its application for efficient 3-hydroxypropionaldehyde production from glycerol.AMB Express · 2013Article
- Psychrophilic enzymes: from folding to function and biotechnology.Scientifica · 2013Review
- Occurrence of a bacterial membrane microdomain at the cell division site enriched in phospholipids with polyunsaturated hydrocarbon chains.The Journal of biological chemistry · 2012Article
- Identification of cold-inducible inner membrane proteins of the psychrotrophic bacterium, Shewanella livingstonensis Ac10, by proteomic analysis.Extremophiles : life under extreme conditions · 2012Article
- Article
- Membrane vesicles: a common feature in the extracellular matter of cold-adapted antarctic bacteria.Microbial ecology · 2010Article
- Conserved synteny at the protein family level reveals genes underlying Shewanella species' cold tolerance and predicts their novel phenotypes.Functional & integrative genomics · 2010Article
- Identification and expression of the tig gene coding for trigger factor from psychrophilic bacteria with no information of genome sequence available.Current microbiology · 2009Article
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Authors and funding
5 authors.
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No grant is acknowledged in the PubMed record.
Abstract
Proteomic analysis of a cold-adapted bacterium, Shewanella livingstonensis Ac10, isolated from Antarctic seawater was carried out to elucidate its cold-adaptation mechanism. The cells were grown at 4 degrees C and 18 degrees C, and soluble and membrane proteins were analyzed by two-dimensional gel electrophoresis. At 4 degrees C, the relative abundance of 47 soluble proteins and five membrane proteins increased more than twofold, and these proteins were analyzed by peptide mass fingerprinting. Twenty-six soluble proteins and two membrane proteins were identified. These included proteins involved in RNA synthesis and folding (RpoA, GreA, and CspA), protein synthesis and folding (TufB, Efp, LysU, and Tig), membrane transport (OmpA and OmpC), and motility (FlgE and FlgL). Cold-inducible RpoA, GreA, and CspA may be required for efficient and accurate transcription and proper folding of RNA at low temperatures, where base pairing of nucleic acids is stable and undesired secondary structures of RNA tend to form. Tig is supposed to have peptidyl-prolyl cis-trans isomerase activity and facilitate proper folding of proteins at low temperatures. The cold induction of OmpA and OmpC is likely to counteract the low diffusion rate of solutes at low temperatures and enables the efficient uptake of nutrients. These results provided many clues to understand microbial cold-adaptation mechanisms.
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