Evidence map›Paper›PMID 17617515›Full record

ArticleJournal of medical genetics2007

Mutation detection in the ABCC6 gene and genotype-phenotype analysis in a large international case series affected by pseudoxanthoma elasticum.

Ellen G Pfendner, Olivier M Vanakker, Sharon F Terry, Sophia Vourthis, Patricia E McAndrew, Monica R McClain, Sarah Fratta, Anna-Susan Marais, Susan Hariri, Paul J Coucke and 6 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of medical genetics, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 103 papers.

0numbers the graph read from it
0cells of the map it votes in
103citing papers in PubMed
7.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

103 citing papers in PubMed, 195 citations in OpenAlex.

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43 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 7 institutions in 3 countries.

Ellen G PfendnerGeneDx Inc., 207 Perry Parkway, Gaithersburg, Maryland 20877, USA. ellen@genedx.com
Olivier M Vanakker
Sharon F Terry
Sophia Vourthis
Patricia E McAndrew
Monica R McClain
Sarah Fratta
Anna-Susan Marais
Susan Hariri
Paul J Coucke
Michele Ramsay
Denis Viljoen
Patrick F Terry
Anne De Paepe
Jouni Uitto
Lionel G Bercovitch
Ghent University Hospital · BENational Health Laboratory Service · ZABrown University · USCenters for Disease Control and Prevention · USGenVec · USJefferson Institute · USUniversity of Cape Town · ZA

Funding

BIOCHEMISTRY AND MORPHOLOGY OF CONNECTIVE TISSUESR01AR028450 · NIAMS · THOMAS JEFFERSON UNIVERSITY · PI UITTO, JOUNI · 1986 to 2019
$6.5M
Molecular Genetics of Familial Tumoral CalcinosisR01AR052627 · NIAMS · THOMAS JEFFERSON UNIVERSITY · PI UITTO, JOUNI · 2005 to 2009
$1.6M
NIAMS NIH HHS R01 AR028450NIAMS NIH HHS R01 AR052627NIAMS NIH HHS R01AR28450NIAMS NIH HHS R01AR52627
6 · The paper itself

Abstract

backgroundPseudoxanthoma elasticum (PXE), an autosomal recessive disorder with considerable phenotypic variability, mainly affects the eyes, skin and cardiovascular system, characterised by dystrophic mineralization of connective tissues. It is caused by mutations in the ABCC6 (ATP binding cassette family C member 6) gene, which encodes MRP6 (multidrug resistance-associated protein 6).

objectiveTo investigate the mutation spectrum of ABCC6 and possible genotype-phenotype correlations.

methodsMutation data were collected on an international case series of 270 patients with PXE (239 probands, 31 affected family members). A denaturing high-performance liquid chromatography-based assay was developed to screen for mutations in all 31 exons, eliminating pseudogene coamplification. In 134 patients with a known phenotype and both mutations identified, genotype-phenotype correlations were assessed.

resultsIn total, 316 mutant alleles in ABCC6, including 39 novel mutations, were identified in 239 probands. Mutations were found to cluster in exons 24 and 28, corresponding to the second nucleotide-binding fold and the last intracellular domain of the protein. Together with the recurrent R1141X and del23-29 mutations, these mutations accounted for 71.5% of the total individual mutations identified. Genotype-phenotype analysis failed to reveal a significant correlation between the types of mutations identified or their predicted effect on the expression of the protein and the age of onset and severity of the disease.

conclusionsThis study emphasises the principal role of ABCC6 mutations in the pathogenesis of PXE, but the reasons for phenotypic variability remain to be explored.

Indexed as

DNA Mutational AnalysisAllelesATP-Binding Cassette, Sub-Family C ProteinsChromatography, High Pressure LiquidCodonGenes, RecessiveGenotypeHumansInternational CooperationModels, GeneticMutationMutation, MissensePhenotypePseudoxanthoma ElasticumSkin DiseasesABCC6 protein, humanATP-Binding Cassette, Sub-Family C ProteinsCodon

Identifiers

PMID17617515
PMCPMC2597973
OpenAlexW2070669725

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.