Evidence map›Paper›PMID 17611618›Full record

ArticlePloS one2007

Genetic diversity among Enterococcus faecalis.

Shonna M McBride, Vincent A Fischetti, Donald J Leblanc, Robert C Moellering, Michael S Gilmore

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 151 papers.

0numbers the graph read from it
0cells of the map it votes in
151citing papers in PubMed
6.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

151 citing papers in PubMed, 338 citations in OpenAlex.

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  13. Antimicrobial resistance characterization ofJournal of water and health · 2024
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  14. Function and contribution of two putativeInfection and immunity · 2024
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  16. Complete genome sequence of enterococcal phage G01.Microbiology resource announcements · 2024
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  18. Genotypic and phenotypic characterization ofbioRxiv : the preprint server for biology · 2024
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  19. Article
  20. Article

91 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 5 institutions in 1 country.

Shonna M McBrideSchepens Eye Research Institute, Harvard Medical School, Boston, Massachusetts, United States of America.
Vincent A Fischetti
Donald J Leblanc
Robert C Moellering
Michael S Gilmore
Beth Israel Deaconess Medical Center · USMassachusetts Eye and Ear Infirmary · USPfizer (United States) · USRockefeller University · USSmith-Kettlewell Eye Research Institute · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Enterococcus faecalis, a ubiquitous member of mammalian gastrointestinal flora, is a leading cause of nosocomial infections and a growing public health concern. The enterococci responsible for these infections are often resistant to multiple antibiotics and have become notorious for their ability to acquire and disseminate antibiotic resistances. In the current study, we examined genetic relationships among 106 strains of E. faecalis isolated over the past 100 years, including strains identified for their diversity and used historically for serotyping, strains that have been adapted for laboratory use, and isolates from previously described E. faecalis infection outbreaks. This collection also includes isolates first characterized as having novel plasmids, virulence traits, antibiotic resistances, and pathogenicity island (PAI) components. We evaluated variation in factors contributing to pathogenicity, including toxin production, antibiotic resistance, polymorphism in the capsule (cps) operon, pathogenicity island (PAI) gene content, and other accessory factors. This information was correlated with multi-locus sequence typing (MLST) data, which was used to define genetic lineages. Our findings show that virulence and antibiotic resistance traits can be found within many diverse lineages of E. faecalis. However, lineages have emerged that have caused infection outbreaks globally, in which several new antibiotic resistances have entered the species, and in which virulence traits have converged. Comparing genomic hybridization profiles, using a microarray, of strains identified by MLST as spanning the diversity of the species, allowed us to identify the core E. faecalis genome as consisting of an estimated 2057 unique genes.

Indexed as

Genetic VariationAnti-Bacterial AgentsComputational BiologyEnterococcus faecalisGastrointestinal TractGenotypeGram-Positive Bacterial InfectionsHumansPhylogenyPolymerase Chain ReactionPolymorphism, GeneticPublic HealthSerotypingAnti-Bacterial Agents

Identifiers

PMID17611618
PMCPMC1899230
OpenAlexW2108954741

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.