Evidence map›Paper›PMID 17604452›Full record

ArticlePLoS pathogens2007

Genome-wide fitness test and mechanism-of-action studies of inhibitory compounds in Candida albicans.

Deming Xu, Bo Jiang, Troy Ketela, Sebastien Lemieux, Karynn Veillette, Nick Martel, John Davison, Susan Sillaots, Steve Trosok, Catherine Bachewich and 3 more

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 144 papers.

0numbers the graph read from it
0cells of the map it votes in
144citing papers in PubMed
7.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

144 citing papers in PubMed, 253 citations in OpenAlex.

  1. Article
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  9. Echinocandin Adaptation inJournal of fungi (Basel, Switzerland) · 2025
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  10. Aneuploidy enables adaptation to brefeldin A inFrontiers in cellular and infection microbiology · 2025
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  12. Review
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  14. Antifungal Synergy: Mechanistic Insights into the R-1-R Peptide andInternational journal of molecular sciences · 2024
    Article
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  17. Review
  18. Article
  19. Unmasking the Antifungal Activity ofJournal of fungi (Basel, Switzerland) · 2024
    Article
  20. Article

84 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 2 countries.

Deming XuCenter of Fungal Genetics, Merck Frosst Canada Ltd., Montreal, Quebec, Canada.
Bo Jiang
Troy Ketela
Sebastien Lemieux
Karynn Veillette
Nick Martel
John Davison
Susan Sillaots
Steve Trosok
Catherine Bachewich
Howard Bussey
Phil Youngman
Terry Roemer
Merck Canada Inc. (Canada) · CAConcordia University · CAInfinity Pharmaceuticals (United States) · USMcGill University · CAMerck & Co., Inc., Rahway, NJ, USA (United States) · USUniversité de Montréal · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Candida albicans is a prevalent fungal pathogen amongst the immunocompromised population, causing both superficial and life-threatening infections. Since C. albicans is diploid, classical transmission genetics can not be performed to study specific aspects of its biology and pathogenesis. Here, we exploit the diploid status of C. albicans by constructing a library of 2,868 heterozygous deletion mutants and screening this collection using 35 known or novel compounds to survey chemically induced haploinsufficiency in the pathogen. In this reverse genetic assay termed the fitness test, genes related to the mechanism of action of the probe compounds are clearly identified, supporting their functional roles and genetic interactions. In this report, chemical-genetic relationships are provided for multiple FDA-approved antifungal drugs (fluconazole, voriconazole, caspofungin, 5-fluorocytosine, and amphotericin B) as well as additional compounds targeting ergosterol, fatty acid and sphingolipid biosynthesis, microtubules, actin, secretion, rRNA processing, translation, glycosylation, and protein folding mechanisms. We also demonstrate how chemically induced haploinsufficiency profiles can be used to identify the mechanism of action of novel antifungal agents, thereby illustrating the potential utility of this approach to antifungal drug discovery.

Indexed as

Drug DesignGenome, FungalAntifungal AgentsCandida albicansDNA, FungalGene Expression ProfilingGene Expression Regulation, FungalMicrobial Sensitivity TestsOligonucleotide Array Sequence AnalysisRNA, MessengerAntifungal AgentsDNA, FungalRNA, Messenger

Identifiers

PMID17604452
PMCPMC1904411
OpenAlexW2094285560

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.