Evidence map›Paper›PMID 17603095›Full record

ArticleGenetics2007

Comparative analyses between lolium/festuca introgression lines and rice reveal the major fraction of functionally annotated gene models is located in recombination-poor/very recombination-poor regions of the genome.

Julie King, Ian P Armstead, S Iain Donnison, Luned A Roberts, John A Harper, Kirsten Skøt, Kieran Elborough, Ian P King

Open access · hybridAbstract readComparative Study
In one paragraph

Article in Genetics, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.2field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 32 citations in OpenAlex.

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  11. Development of intron-flanking EST markers for the Lolium/Festuca complex using rice genomic information.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2009
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Julie KingPlant Genetics and Breeding Department, Institute of Grassland and Environmental Research, Aberystwyth, SY23 3EB, United Kingdom. julie.king@bbsrc.ac.uk
Ian P Armstead
S Iain Donnison
Luned A Roberts
John A Harper
Kirsten Skøt
Kieran Elborough
Ian P King
Aberystwyth University · GB

Funding

Biotechnology and Biological Sciences Research Council BB/E00654X/1
6 · The paper itself

Abstract

Publication of the rice genome sequence has allowed an in-depth analysis of genome organization in a model monocot plant species. This has provided a powerful tool for genome analysis in large-genome unsequenced agriculturally important monocot species such as wheat, barley, rye, Lolium, etc. Previous data have indicated that the majority of genes in large-genome monocots are located toward the ends of chromosomes in gene-rich regions that undergo high frequencies of recombination. Here we demonstrate that a substantial component of the coding sequences in monocots is localized proximally in regions of very low and even negligible recombination frequencies. The implications of our findings are that during domestication of monocot plant species selection has concentrated on genes located in the terminal regions of chromosomes within areas of high recombination frequency. Thus a large proportion of the genetic variation available for selection of superior plant genotypes has not been exploited. In addition our findings raise the possibility of the evolutionary development of large supergene complexes that confer a selective advantage to the individual.

Indexed as

Genome, PlantModels, GeneticRecombination, GeneticChromosome MappingCodonEvolution, MolecularGene DeletionGenes, PlantLoliumOryzaCodon

Identifiers

PMID17603095
PMCPMC2013687
OpenAlexW2119530273

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.