Evidence map›Paper›PMID 17600274›Full record

ArticleAmerican journal of respiratory and critical care medicine2007

Spectral karyotyping detects chromosome damage in bronchial cells of smokers and patients with cancer.

Marileila Varella-Garcia, Lin Chen, Roger L Powell, Fred R Hirsch, Timothy C Kennedy, Robert Keith, York E Miller, John D Mitchell, Wilbur A Franklin

Open access · greenAbstract read
In one paragraph

Article in American journal of respiratory and critical care medicine, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 32 citations in OpenAlex.

  1. Polyploidy and Senescence of Cancer Cells: Impact of Cell Fusion.Advances in experimental medicine and biology · 2026
    Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Progressive endobronchial premalignancy: marked by original CIN.American journal of respiratory and critical care medicine · 2011
    Article
  11. Somatic chromosome abnormalities in the lungs of patients with pulmonary arterial hypertension.American journal of respiratory and critical care medicine · 2010
    Article
  12. Review
  13. Genetically abnormal circulating cells in lung cancer patients: an antigen-independent fluorescence in situ hybridization-based case-control study.Clinical cancer research : an official journal of the American Association for Cancer Research · 2010
    Article
  14. Article
  15. Biosafety assessment of site-directed transgene integration in human umbilical cord-lining cells.Molecular therapy : the journal of the American Society of Gene Therapy · 2010
    Article
  16. Article
  17. Smoking-related genomic signatures in non-small cell lung cancer.American journal of respiratory and critical care medicine · 2008
    Article
  18. Update in lung cancer 2007.American journal of respiratory and critical care medicine · 2008
    Review
  19. Chromosomal aneusomy in bronchial high-grade lesions is associated with invasive lung cancer.American journal of respiratory and critical care medicine · 2008
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 1 country.

Marileila Varella-GarciaDepartment of Medicine, School of Medicine, University of Colorado, Denver Health Sciences Center, Denver, Colorado, USA.
Lin Chen
Roger L Powell
Fred R Hirsch
Timothy C Kennedy
Robert Keith
York E Miller
John D Mitchell
Wilbur A Franklin
United States Department of Veterans Affairs · USUniversity of Colorado Health · USDenver Health Medical Center · USSt. Luke's Hospital · USUniversity of Colorado Denver · US

Funding

University of Colorado Cancer Center Support Grant - Lung Cancer Patient-Derived Xenografts with Autologous Human Immune SystemsP30CA046934 · NCI · UNIVERSITY OF COLORADO DENVER · PI James V Degregori · 1988 to 2026
$117.0M
Tissue Bank and Biomarkers CoreP50CA058187 · NCI · UNIVERSITY OF COLORADO DENVER · PI MILLER, YORK E · 1992 to 2018
$43.8M
Colorado Biomarkers Development LaboratoryU01CA085070 · NCI · UNIVERSITY OF COLORADO DENVER · PI FRANKLIN, WILBUR A · 1999 to 2009
$4.1M
NCI NIH HHS P01-CA58187NCI NIH HHS P30-CA46934NCI NIH HHS U01-CA85070
6 · The paper itself

Abstract

rationaleLung cancer is a multistep process that is preceded and often accompanied by molecular cytogenetic lesions in benign bronchial epithelium, the precise character, extent and timing of which are not well defined.

objectivesIn this study we comprehensively defined molecular cytogenetic changes in bronchial cells that may precede lung carcinoma using spectral karyotyping (SKY).

methodsSKY was applied to cultured benign bronchial cells from 43 high-risk smokers without carcinoma, 14 patients with concurrent lung carcinoma, and 14 never-smoker healthy volunteers. MEASUREMENTS AND MAIN

resultsThe proportion of cells displaying numeric or structural anomalies/total number of metaphase cells was calculated for each case and was referred to as the chromosomal abnormality index. Mean chromosomal abnormality indices were 15.8, 10.1, and 0.7% for patients with cancer, high-risk smokers, and never-smokers, respectively. Clonal abnormalities were found in 17 (40%) of the high-risk smokers without carcinoma and 7 (50%) of the patients with carcinoma, but in none of 14 (0%) never-smokers. Chromosomal gains observed by SKY were confirmed in interphase cultured cells or paraffin sections of biopsy specimens by fluorescence in situ hybridization in 11 of 13 cases for which appropriate probes were available. In 6 of 57 high-risk patients or those with carcinoma, identical clonal abnormalities were dispersed at multiple bronchial sites and were admixed with nonclonal cells.

conclusionsClonal and single-cell chromosomal abnormalities are frequent in benign bronchial epithelium during lung carcinogenesis, indicating that chromosomal missegregation and other chromosomal rearrangements occur before overt malignancy.

Indexed as

Chromosome AberrationsSpectral KaryotypingAdultAgedAged, 80 and overBiomarkers, TumorBronchiCase-Control StudiesCells, CulturedFemaleHumansIn Situ Hybridization, FluorescenceLung NeoplasmsMaleMiddle AgedPrecancerous ConditionsBiomarkers, Tumor

Identifiers

PMID17600274
PMCPMC1976541
OpenAlexW1969990807

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.