Evidence map›Paper›PMID 17597793›Full record

ArticleGene therapy2007

The woodchuck hepatitis virus post-transcriptional regulatory element reduces readthrough transcription from retroviral vectors.

T Higashimoto, F Urbinati, A Perumbeti, G Jiang, A Zarzuela, L-J Chang, D B Kohn, P Malik

Abstract read
PubMed Publisher
In one paragraph

Article in Gene therapy, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed, 1 pooled it
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 1 synthesis or guideline pooled it, 95 citations in OpenAlex.

  1. Pooled it
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  5. Review
  6. Article
  7. Humanized extracellular vesicles for efficient RNA delivery.Proceedings of the National Academy of Sciences of the United States of America · 2026
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  9. Humanized Extracellular Vesicles for Efficient RNA Delivery.bioRxiv : the preprint server for biology · 2025
    Article
  10. Review
  11. Article
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  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Plugging synthetic DNA nanoparticles into the central dogma of life.Chemical communications (Cambridge, England) · 2024
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

T HigashimotoDivision of Hematology-Oncology, Department of Pediatrics and Pathology, Keck School of Medicine University of Southern California, Childrens Hospital Los Angeles, Los Angeles, CA, USA.
F Urbinati
A Perumbeti
G Jiang
A Zarzuela
L-J Chang
D B Kohn
P Malik
Children's Hospital of Los Angeles · USCincinnati Children's Hospital Medical Center · USUniversity of Southern California · USUniversity of Florida · US

Funding

Transduction of Human Stem and Progenitor CellsP01HL073104 · NHLBI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI KOHN, DONALD B · 2003 to 2013
$18.3M
ROLE OF ENDOTHELIN-1 INSICKLEACUTE CHEST SYNDROMEU54HL070595 · NHLBI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI MALIK, PUNAM · 2003 to 2007
$8.3M
Lentiviral vectors for gene therapy for beta-thalassemiaR01HL070135 · NHLBI · CINCINNATI CHILDRENS HOSP MED CTR · PI MALIK, PUNAM · 2002 to 2006
$1.5M
NHLBI NIH HHS P01-HL073104NHLBI NIH HHS R01-HL70135-01NHLBI NIH HHS U54-HL070595
6 · The paper itself

Abstract

The woodchuck hepatitis virus post-transcriptional regulatory element (WPRE) increases transgene expression from a variety of viral vectors, although the precise mechanism is not known. WPRE is most effective when placed downstream of the transgene, proximal to the polyadenylation signal. We hypothesized that WPRE likely reduces viral mRNA readthrough transcription by improving transcript termination, which in turn would increase viral titers and expression. Using a Cre-lox-mediated plasmid-based assay, we found significant readthrough transcription from gamma-retroviral vector (RV) long terminal repeat (wt RV-LTR) and RV LTR with a self-inactivating deletion (SIN RV-LTR). WPRE, when placed upstream of the RV LTRs, significantly reduced readthrough transcription. Readthrough, present at much lower levels with the SIN HIV-1 LV-LTR, was also reduced with WPRE. When placed in RV vectors, WPRE increased total RV genomic mRNA; and increased viral titers from transiently transfected 293T cells and stable PG13 producer cells by 7- to 15-fold. The mechanism of increased titers and expression was not due to increased nuclear mRNA export, increased rate of viral transcription or a significant increase in viral mRNA half-life. Our results showed that WPRE improved vector genomic transcript termination to increase titers and expression from RVs.

Indexed as

Genetic EngineeringRegulatory Elements, TranscriptionalTranscription, GeneticAnimalsCell LineGene ExpressionGene Expression Regulation, ViralGenetic VectorsHepatitis B Virus, WoodchuckHumansLeukemia Virus, MurineReading FramesRetroviridaeRNA Processing, Post-TranscriptionalSimian Immunodeficiency VirusTerminal Repeat Sequences

Identifiers

PMID17597793
OpenAlexW1975554944

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.