Evidence map›Paper›PMID 17596354›Full record

ArticleJournal of clinical microbiology2007

Development and evaluation of a line probe assay for rapid identification of pncA mutations in pyrazinamide-resistant mycobacterium tuberculosis strains.

Jun-Ichiro Sekiguchi, Tomohiko Nakamura, Tohru Miyoshi-Akiyama, Fumiko Kirikae, Intetsu Kobayashi, Ewa Augustynowicz-Kopec, Zofia Zwolska, Koji Morita, Toshinori Suetake, Hiroshi Yoshida and 3 more

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In one paragraph

Article in Journal of clinical microbiology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed, 2 pooled it
2.3field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 2 syntheses or guidelines pooled it, 51 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
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  6. Novel Mutations inScientia pharmaceutica · 2018
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  7. Detection ofAntimicrobial agents and chemotherapy · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 2 countries.

Jun-Ichiro SekiguchiDepartment of Infectious Diseases, Research Institute, International Medical Center of Japan, 1-21-1 Toyama, Shinjuku, Tokyo 162-8655, Japan.
Tomohiko Nakamura
Tohru Miyoshi-Akiyama
Fumiko Kirikae
Intetsu Kobayashi
Ewa Augustynowicz-Kopec
Zofia Zwolska
Koji Morita
Toshinori Suetake
Hiroshi Yoshida
Seiya Kato
Toru Mori
Teruo Kirikae
National Institute of Infectious Diseases · JPNipro (Japan) · JPNational Institute of Public Health · PLJapan Anti Tuberculosis Association · JPKyorin University · JPMitsubishi Chemical (Japan) · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Resistance of Mycobacterium tuberculosis to pyrazinamide (PZA) derives mainly from mutations in the pncA gene. We developed a reverse hybridization-based line probe assay with oligonucleotide probes designed to detect mutations in pncA. The detection of PZA resistance was evaluated in 258 clinical isolates of M. tuberculosis. The sensitivity and specificity of PZA resistance obtained by this new assay were both 100%, consistent with the results of conventional PZA susceptibility testing. This assay can be used with sputa from tuberculosis patients. It appears to be reliable and widely applicable and, given its simplicity and rapid performance, will be a valuable tool for diagnostic use.

Indexed as

AmidohydrolasesAntitubercular AgentsDrug Resistance, BacterialHumansMicrobial Sensitivity TestsMutation, MissenseMycobacterium tuberculosisNucleic Acid HybridizationOligonucleotide ProbesPyrazinamideSensitivity and SpecificitySputumTuberculosisAmidohydrolasesAntitubercular AgentsOligonucleotide ProbesPncA protein, Mycobacterium tuberculosisPyrazinamide

Identifiers

PMID17596354
PMCPMC2045301
OpenAlexW2112139993

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.