Evidence map›Paper›PMID 17593423›Full record

ArticleMicrobial ecology2007

Archaeal communities in a tropical estuarine ecosystem: Guanabara Bay, Brazil.

Ricardo P Vieira, Maysa M Clementino, Alexander M Cardoso, Denise N Oliveira, Rodolpho M Albano, Alessandra M Gonzalez, Rodolfo Paranhos, Orlando B Martins

Abstract read
PubMed Publisher
In one paragraph

Article in Microbial ecology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 65 citations in OpenAlex.

  1. Article
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  4. The Distribution ofFrontiers in microbiology · 2020
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  20. Hunting for extremophiles in rio de janeiro.Frontiers in microbiology · 2011
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Ricardo P VieiraDepartamento de Biologia Marinha, Universidade Federal do Rio de Janeiro, Rio de Janeiro, 21941-590, Brazil.
Maysa M Clementino
Alexander M Cardoso
Denise N Oliveira
Rodolpho M Albano
Alessandra M Gonzalez
Rodolfo Paranhos
Orlando B Martins
Universidade Federal do Rio de Janeiro · BRUniversidade do Estado do Rio de Janeiro · BRFundação Oswaldo Cruz · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Guanabara Bay is an eutrophic estuarine system located in a humid tropical region surrounded by the second largest metropolitan area of Brazil. This study explores the contrasting environmental chemistry and microbiological parameters that influence the archaeaplankton diversity in a pollution gradient in Guanabara Bay ecosystem. The environments sampled ranged from completely anoxic waters in a polluted inner channel to the adjacent, relatively pristine, coastal Atlantic Ocean. Partial archaeal 16S rDNA sequences in water samples were retrieved by polymerase chain reaction (PCR) and analyzed using denaturing gradient gel electrophoresis (DGGE), cloning, and sequencing. Sequences were subjected to phylogenetic and diversity analyses. Community structure of the free-living archaeal assemblages was different from that of the particle-attached archaea according to DGGE. Gene libraries revealed that phylotype identification was consistent with environmental setting. Archaeal phylotypes found in polluted anoxic waters and in more pristine waters were closely related to organisms that have previously been found in these environments. However, inner bay archaea were related to organisms found in oil, industrial wastes, and sewage, implying that water pollution controls archaea communities in this system. The detection of a substantial number of uncultured phylotypes suggests that Guanabara Bay harbors a pool of novel archaeaplankton taxa.

Indexed as

EcosystemArchaeaBrazilDNA, ArchaealGeographyMolecular Sequence DataPhylogenyPolymerase Chain ReactionRNA, Ribosomal, 16SSeawaterSequence Analysis, DNADNA, ArchaealRNA, Ribosomal, 16S

Identifiers

PMID17593423
OpenAlexW2136688305

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.